| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0251 |
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| Symbol | |
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| ID | 3706325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 276042 |
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| End bp | 278141 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637736767 |
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| Product | fimbrial assembly protein pilQ precursor |
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| Protein accession | YP_342311 |
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| Protein GI | 77163786 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.215469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGG CGCATAAAAT CGTTCCACAT GATTCGAGGA AAGCGTACAG AGAACGCTGT
TTCCTGCCTG CCTTGATAGG GTTGCTGCTT CTGTGTTGGC TGCCCTGTAT AACCTTTGCC
GCTACCAAAT TGCAGGGCAT TGAATACTCA TCTTTACCCG GTGAGGGTGT TCAACTTCGG
TTGGAGTTCT CAGCGCCTGT TGCTGAGCCT ACATTTTTTG CAATTGATGA CCCTGCTCGC
ATCGTACTAG ATTTCCCCAG GGTCAAAATT GGTACAGTGC GTCAGTCCCA GGTGATTGGA
GCAGGGATGA CGCGCAGTGT CACTATGGTA GAGGCAGCTG ATCGCACCCG GGTTGTCGTT
AATTTAGTTC AGAGCGTACC TTTTGAAACT CGAGTGGATA AAAACTTCGT TTATGTTACC
GTGAACGGTT TTCCTGCTGC CGCCTCGGCT GAAAAAAGTG GCGCTGCTCC TACTGGACGT
CATTTAATCA AAAATATCGA CTTTCGGCGA GGCGAAGCCG GTGAAGGCCG GGTTATTGTA
TCCCTCTCAG ATATCCGGAC CCCAGTGGAT ATCCGAGAGG AGGGGAAACG TATTATTGTT
GATTTTATTA ATACGGCGCT ACCCAATGAG CTTGAGCGGC GTCTCGATGT TTTGGACTTT
GCGACGCCGG TTAAACTCGT CGATACTTTT ACCAAGAATC AGAATGTTCG TATGGTGATT
ACTCCGGCAA ATGTTGAACA TGAGTATCTT TCTTATCAGT CTGACGATAC GCTGGTTGTC
GAGCTTAAAC CGCTTACTAA AAAGGAAAAG GAATTAGCTA GGAAAAAAGA ATTCGGTTAT
GTGGGCGAAA AACTTTCCCT GAATTTCCAG AGCATTGAAG TTCGATCCGT ATTGCAGTTG
ATTGCCGATT TCACGGGTCT TAACCTGGTG GCAAGTGATA CGGTACAAGG GAGTGTGACG
TTGCGGCTTA AAAATGTACC CTGGGATCAA GCCCTGGATA TTATTTTGAG AACCAAGGGG
TTAGCTATGC GCCGTATGGG TAACGTCGTT TTGGTCGCGC CGAGCCAAGA GATTGCCGAC
CGTGAAAAGT TGGAGTTGGA AGCCAGAAAA CAGGTGGAAG AACTAGCGCC CCTAGGCTCT
GAGTTTATCC AGGTTAATTT TGCCAAGGCT AGCAATCTTG CTGCGCTTAT TCAATCGGAG
GAAAACTCTC TTTTGTCGCC ACGGGGTCAT GCGACGTTCG ATGAACGGAC CAATACTCTA
TTGGTTATGG ATACGGCAGA TAGGCTTGCT GCGCTTCGAA AGCTAGTTGC TAGCTTGGAT
ATTCCAGTAC GGCAAGTGCT TATTGAATCT CGTGTGGTTA TTGCAAGTAG CGATTTTAGT
AGAGATTTAG GCGTTCGTTT TGGTTTGAGC GGACGAGGAG ACACTAGTGG GACTTTCGAT
CAAGCAACGA CTTCAGGTTC ATTGAATGGT ACGACTCAGA TTATCAATCG GGAAACTCTG
GAGCTTCAGG ATCGGCTAAA TGTCAATTTT CCTGTGACCA AAAAGGACGC AGCGAAGATT
GCCCTTGCTT TGACGAATCT GCCCCTAGGC GCTTTACTAG AATTAGAGCT TTCAGCGCTT
CAGGCGGAAG GGCGCGGCGA AGTAATTTCT AACCCGCGGG TTATTACCTC TAATCAAAAA
GAAGCCATAA TTGAGCAGGG TACCGAAATT CCCTATCAGC GGGCTTCCTC TAGCGGGGCT
ACCTCTGTAT CTTTTAAAAA GGCAGTGCTT AGCTTAACGG TGACTCCTCA AATTACCCCT
GATGACAGGA TCATTATGGA TCTCGGTGTA ACGAAGGATA GCGTAGGTAA AGTGTTTAAC
GGGGTGCCGA GTATTAATAC CCGTAAGGTC GCCACTCAGG TGTTGGTAAA TAACGGTCAA
ACAGTTGTGC TCGGCGGAAT TTACGAGCAA GAGAAGAATC GGGCGGTTCG GCGGATACCT
TTTCTTGGAG ATTTACCGTA TGCGGGAATC TTATTTCGCG ATAAATCAGA GTTTAACAAC
AAAAGAGAAC TGCTTATATT TGTGACCCCC AAGATTATCA AGGAGGGAGC AAGACTGTAA
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| Protein sequence | MKPAHKIVPH DSRKAYRERC FLPALIGLLL LCWLPCITFA ATKLQGIEYS SLPGEGVQLR
LEFSAPVAEP TFFAIDDPAR IVLDFPRVKI GTVRQSQVIG AGMTRSVTMV EAADRTRVVV
NLVQSVPFET RVDKNFVYVT VNGFPAAASA EKSGAAPTGR HLIKNIDFRR GEAGEGRVIV
SLSDIRTPVD IREEGKRIIV DFINTALPNE LERRLDVLDF ATPVKLVDTF TKNQNVRMVI
TPANVEHEYL SYQSDDTLVV ELKPLTKKEK ELARKKEFGY VGEKLSLNFQ SIEVRSVLQL
IADFTGLNLV ASDTVQGSVT LRLKNVPWDQ ALDIILRTKG LAMRRMGNVV LVAPSQEIAD
REKLELEARK QVEELAPLGS EFIQVNFAKA SNLAALIQSE ENSLLSPRGH ATFDERTNTL
LVMDTADRLA ALRKLVASLD IPVRQVLIES RVVIASSDFS RDLGVRFGLS GRGDTSGTFD
QATTSGSLNG TTQIINRETL ELQDRLNVNF PVTKKDAAKI ALALTNLPLG ALLELELSAL
QAEGRGEVIS NPRVITSNQK EAIIEQGTEI PYQRASSSGA TSVSFKKAVL SLTVTPQITP
DDRIIMDLGV TKDSVGKVFN GVPSINTRKV ATQVLVNNGQ TVVLGGIYEQ EKNRAVRRIP
FLGDLPYAGI LFRDKSEFNN KRELLIFVTP KIIKEGARL
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