| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0241 |
|---|
| Symbol | lnt |
|---|
| ID | 3706296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 265021 |
|---|
| End bp | 266586 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637736757 |
|---|
| Product | apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_342301 |
|---|
| Protein GI | 77163776 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0815] Apolipoprotein N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTACA CGCCTGAGCA GAAGCCATTT TATGAAAGAG TCTGTCAGAA AAAATGTTTT
TTTTCTGACT CGGCGGGAGC AAAAACCTGG TGTGGTGACG CCTTAGCCTT GGTAGCGGGG
CTTCTCGGTC CCCTCGCTTT TTCGCCTTAT AATTTCTACC CTTTGGCGGT TATTCTTCCC
GCATTGTTAT TTGTTGTATG TCGGAATTTG TCCGCTCGGC GGGCTTTTTG GCGTGGCTGG
TTATTTGGAT TGGGGTGGTT TGGCGCAGGG GTTTCCTGGG TTTATTTTGC CATTCACGAC
TTTGGCTATG CCAGTGTACC GTTAGCACTA GGATTAACCA CATCATTCGT GGCTTTTTTG
AGTCTTTTCC CAGCGATACT GTCGGGAAGC GTTGCTTTGT TGTTTCCTCA GGAGAATAGC
CGTAAATATC TTTTGGTATG GCCAGCAGCC TGGGTGATGA TAGAGTGGTT TCGGGGTTGG
TTTCTTACCG GTTTCCCATG GCTAAATCTT GGTTACAGTC AAATAGAAAG TCCCCTTCGC
GGGTTGGCGC CGATTGTGGG GGCTTATGGC GTTTCTTTAG CGGTGGCTTT TAGCGCAGGG
CTGATCGTAG TTGCTTGGCG CTGGGCTCAA CGGACGCGCC TGATAGCGCT TGGTAGCTTG
GGAATTCTAT GGGCTTCGGC ACTGCTGCTC TCCTTGGTAT CTTGGACGAC GCCGGTAGGT
AAGCCGCTGC AGGTAAGTTT GATTCAGGGA AATATTCCTC AGGCTATCAA ATGGCAACCG
GAGCAAATAG AGGCCACTTT AGAGCGGTAC TGGCAGTTAA CTGCTAAGCA TTGGGAGAGC
GATCTGATTG TTTGGCCGGA GAGCGCGCTT ACTGTATTTT ATCACCAGGT GGCTAATGGT
TACCTGGCTG CCCTTGCTGC CGAAGCCCGA GTCCATGGCA CGGATTTGCT CATTGGCTTG
CCGGTTTTCC ACCAGGAAAC GGGAAAATAT TATAATGGCA TGCTAAGCCT CGGCTCCCAG
CAGGCATTTT ATTATAAGCG GCATTTAGTT CCTTTCGGCG AATATATACC TTTTGAAGAA
TACCTTAGAG GGCTTATCCG CTTTTTCGAT TTGCCCATGT CCTCTTTCAG TGCTGGCCCC
GAGGGACAGC CCTTGTTGCA AGCCGCTGGC TACCCGGTAG CTACCTCTAT TTGTTATGAA
GATGCATTTG GAGAAGAAGT CATTACGGCG CTGCCCGAAG CTAATTTATT GGTGAATGCC
ACCAACAATG CTTGGTATAG GGATTCTTTG GCGTCTCACC AGCATCTACA GATTTCCCGG
ATGCGCGCCC TGGAGACAGG GCGGGATCTA GCCCGGGCTA CTACCAATGG TATCTCCGCT
ATTATTGATG CTCAAGGTGC TTTGCTAGCC ACCACCCCTC AGTTCCAAAC GGCGGTACTC
ACAGGTAGCG TTCAACCCCG TGCTGGCGCG ACGCCCTATG TCTTCTGGGG TAATGAATTC
ATCCTAGGAT TATGCCTGTG TTTATTCGCC ATTGGAAGTT ATTACCCGCG TAGTAAAGGA
AGCTAG
|
|---|
| Protein sequence | MGYTPEQKPF YERVCQKKCF FSDSAGAKTW CGDALALVAG LLGPLAFSPY NFYPLAVILP
ALLFVVCRNL SARRAFWRGW LFGLGWFGAG VSWVYFAIHD FGYASVPLAL GLTTSFVAFL
SLFPAILSGS VALLFPQENS RKYLLVWPAA WVMIEWFRGW FLTGFPWLNL GYSQIESPLR
GLAPIVGAYG VSLAVAFSAG LIVVAWRWAQ RTRLIALGSL GILWASALLL SLVSWTTPVG
KPLQVSLIQG NIPQAIKWQP EQIEATLERY WQLTAKHWES DLIVWPESAL TVFYHQVANG
YLAALAAEAR VHGTDLLIGL PVFHQETGKY YNGMLSLGSQ QAFYYKRHLV PFGEYIPFEE
YLRGLIRFFD LPMSSFSAGP EGQPLLQAAG YPVATSICYE DAFGEEVITA LPEANLLVNA
TNNAWYRDSL ASHQHLQISR MRALETGRDL ARATTNGISA IIDAQGALLA TTPQFQTAVL
TGSVQPRAGA TPYVFWGNEF ILGLCLCLFA IGSYYPRSKG S
|
|---|
| |