Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0227 |
Symbol | |
ID | 3706282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 251159 |
End bp | 252547 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637736743 |
Product | PAS /MASE1 sensor domain-containing protein |
Protein accession | YP_342287 |
Protein GI | 77163762 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3447] Predicted integral membrane sensor domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGGTA AACCCGTAAC AAGAGCGCAG GGAATCCGTT TTCTGGCGGT CGGTCTAGCT TATTTTCTGA CTGCCTTGCT CAAAACTGAG CTATCTAACG AAGGCGACAA TATCGCCGTG CTGTGGCCAT CGAACGCCAT CCTCATCGGC GTACTATTGC GGGCCAACCC TCGCTACTGG CCGGGTTACT TCGGGAGCTG CCTGCTAGCC GACCTAGTGG CCAGCAAGCT GATGGGTGAG TCAACCAGTA TCGCGCTAGG GTTTATGCTG GCCAATGGCT TGGCGGTTGC CGTAACGGTC GCTTGCATGC AGCGGCTAAT GCCACTACCG GTTACACTCC GGGAACCCTC GCAACTACTA GCGTTAGTAG GTGCGGGTCT GCTTGGCACC GCCGCGGGCG CAGTCTTCAT TGGGGTGGTC TATGGCACAT TTTACTGGGC CGCGTGGCCG ACTTGGTGGC TCGCCGATGT GGTCAGTATC GCCCTCATCA CACCGGTCCT GCTAAGCGCT TCCTGGCCAG TGGCGAAAAT GTTGCTGACG AAGCGGGCGA TTGAAACGGC AATGGCCTTA CTGAGCGCCG CGGCGGTTAC AGTCGGCGTG TTCCACAGTT CATCGTACGC CCTCATATAC TTAACTGCCC CCGTGATGCT CTGGTTCAGT TTCCGTCTCG GCCTATTTGC GTGTGGGGTA CTGGGACTCG TTATCACTAT CATCGTGGTT GCACTCACGC TGCAAGGCGT GGGTCCCATC GCCAGTCAAG CCGGCGGCAT TTCCTTAACC ACGATTCAAA CGCTGCAAAT TTACCTAAGT CTAGTCATCC TGCCAGCGCT GGTGATTAGC ATCGAGCGTG AAAACCGGCT TCGTGCAGAA GCGGAGATAA TACAAAATCA AGCACGCTAT CGCTCGCTCT ATCATGATAC CCCGGCCATG CTGCACTCGA TTGATCATCA AGGGCGGCTG CTCAGGGTCA GCGCTTATTG GCTCACCATC ATGGGCTATG AGCACGATGA GGTCATTGGG CGGTGCTCTA CGGATTTTAT GACCGAGGCC TCCCGCCGCT ACGCGACCGA GGTTGTACTA CCGGCATTTA TGCGTAGCGG CGCTTGCCGC GACGTCCCTT ACCAAATGGT AAAGAAAAAC GGCGAAGTTT TTGATGTCCT GCTATCGGCC ATTGCCGAGC GCGACCCTGA CGGCAGTGTG GCTCACTCGC TCACAGTAAT GCATGATGTC ACCGCCCGTA ACCGTGCCGA GGCCGCGCTG GTCGCCGAAA AAGAGCGTAT CCAGGTAACC CTGGAATCCA AAAGAAAAAC GGCGAAGTTT TTGATGTCCT GCTATCGGCC ATTGCCGAGC GCGACCCTGA CGGCAGTGTG GCTCACTCGC TCACAGTAA
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Protein sequence | MGGKPVTRAQ GIRFLAVGLA YFLTALLKTE LSNEGDNIAV LWPSNAILIG VLLRANPRYW PGYFGSCLLA DLVASKLMGE STSIALGFML ANGLAVAVTV ACMQRLMPLP VTLREPSQLL ALVGAGLLGT AAGAVFIGVV YGTFYWAAWP TWWLADVVSI ALITPVLLSA SWPVAKMLLT KRAIETAMAL LSAAAVTVGV FHSSSYALIY LTAPVMLWFS FRLGLFACGV LGLVITIIVV ALTLQGVGPI ASQAGGISLT TIQTLQIYLS LVILPALVIS IERENRLRAE AEIIQNQARY RSLYHDTPAM LHSIDHQGRL LRVSAYWLTI MGYEHDEVIG RCSTDFMTEA SRRYATEVVL PAFMRSGACR DVPYQMVKKN GEVFDVLLSA IAERDPDGSV AHSLTVMHDV TARNRAEAAL VAEKERIQVT LESKRKTAKF LMSCYRPLPS ATLTAVWLTR SQ
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