Gene Noc_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0223 
Symbol 
ID3706278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp245434 
End bp246852 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content53% 
IMG OID637736739 
ProductDnaB helicase 
Protein accessionYP_342283 
Protein GI77163758 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGAAC TTGCCTACCA GGAAAAGAAA GATGAATTCG TCGAAGGGTT AAGAATTCCT 
CCCCATTCAA TGGAGGCCGA GCAATCGGTA TTAGGAGGGT TATTACTCGA TAATCAAGCT
TGGGAGCAGA TCGCTGATAT TTTGGGTTCG GAGGATTTCT ACCGCCAGGA CCACCGTCTC
TTATTTCTTT CTATCGGCGA AATGCTTGAA CAATCTCGTC CTTGCGACGT GGTGACCCTC
TCCGAGTGGC TCAAAAATAA ACGGTTACTG GAAGAAACAG GGGGTTTAGC CTATCTCACG
AACCTGGCAC GCAATACCCC TACTGCCGCT AATATCAAAG CCTATGCCGA GGTAGTTCGG
GAGCGTTCGG TGTTGCGCCA GCTTATCCGG GTGGGCACTG ATATTGCTGG TAGTGCCTAC
CAGCCGGAAG GGCGAGAGAG CGGGGAATTG TTAGATGAAG CTGAGAAGCG GGTATTTGAA
ATTGCCGAGC AGGGCGCCCG CGGCCAGCGG AGTTTCGTCA ACATAAAAGA TCTGCTTGGT
AAGGTAGTGG ATCGGATCGA TCACCTGTTC GAGCAGGATA GTCCCATTAC GGGACTTCCC
TCTGGTTTTG CGGATTTTGA CCTGCTAACC TCTGGCCTTC AGCCAGCGGA TTTGATTATT
GCCGCGGGCA GGCCCTCCAT GGGGAAAACC ACCTTTGCCA TGAATATCGC CGAGCATGTG
GCTATTAAGC GCCGGGTTCC TGTGGCGGTG TTTAGCATGG AAATGCCAGG AGAGCAGTTA
GCCATGCGCA TGATGTCTTC TCTGGGACAC ATTGACCAAC ATCGCGTTCG GACAGGCCGC
TTAGAAGACG ATGATTGGCC GCGTCTCACC TCGGCGATCA GCCTATTAAC CGAGGCGCCG
CTTTTTATTG ACGACACCCC AGCTCTTTCC CCGACCGAGC TGCGGGCGCG GGCCCGGCGG
CTGATGCGGG AGCAGGAGGG CCTGGGTCTA ATCCTTATTG ATTATTTGCA GCTGATGCAG
GTGCCGGGTC ACCGGGAAAA TCGGGCGACC GAGATCTCCG AAATTTCACG TAACCTCAAG
GCAGTAGCCA AGGAACTCAA GGTTCCCGTG CTGGCCCTCT CCCAGCTTAA CCGGAGTTTG
GAACAACGGC CTAATAAGCG GCCCGTAATG TCAGATTTAC GTGAATCCGG CGCTATTGAG
CAGGATGCGG ACGTGATAGT ATTTATCTAT CGCGATGAAG TCTATAATGA AGAGAGTCCT
GATCGGGGGA CGGCGGAAAT CATCGTTGGC AAGCAGCGCA ATGGTCCGAT TGGAACTGTG
CGTCTCACTT TCCGTGGCCA ATATACCCGC TTCGAAAATT ATGTACAGGA TGCCTATGGA
GCGGGCTCTG GGTTCCCGGC TGCGGATAAG ATGAATTAG
 
Protein sequence
MPELAYQEKK DEFVEGLRIP PHSMEAEQSV LGGLLLDNQA WEQIADILGS EDFYRQDHRL 
LFLSIGEMLE QSRPCDVVTL SEWLKNKRLL EETGGLAYLT NLARNTPTAA NIKAYAEVVR
ERSVLRQLIR VGTDIAGSAY QPEGRESGEL LDEAEKRVFE IAEQGARGQR SFVNIKDLLG
KVVDRIDHLF EQDSPITGLP SGFADFDLLT SGLQPADLII AAGRPSMGKT TFAMNIAEHV
AIKRRVPVAV FSMEMPGEQL AMRMMSSLGH IDQHRVRTGR LEDDDWPRLT SAISLLTEAP
LFIDDTPALS PTELRARARR LMREQEGLGL ILIDYLQLMQ VPGHRENRAT EISEISRNLK
AVAKELKVPV LALSQLNRSL EQRPNKRPVM SDLRESGAIE QDADVIVFIY RDEVYNEESP
DRGTAEIIVG KQRNGPIGTV RLTFRGQYTR FENYVQDAYG AGSGFPAADK MN