Gene Noc_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0179 
Symbol 
ID3706212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp198813 
End bp199496 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID637736696 
Productcytidylate kinase 
Protein accessionYP_342242 
Protein GI77163717 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0000847233 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG AAATCCCCGT GATTACGGTG GATGGGCCTA GTGGTTCAGG GAAAGGCACC 
TTAGCACAGC AGTTGGCACA GCACTTGGAA TGGCACTACT TAGACAGTGG TGCGATGTAT 
CGGGTATTGG CTCTGGCAGC GGATAAACAT GGCATTGCGC CAAATGCTCC TAAGCAGTTA 
GAAACTTTGG CCCAGAATCT AGATGTCCGA TTTATATCGG GTCTAGAGGG CATGCCAGCA 
CGAGTGTTTC TAGAGGGCTC AGAAGTGAGT GATTCTATCC GTAGAGAAGA ATGTGGTAAT 
GCTGCTTCAA AGATTGCTGC TTTGGCTGAG GTACGGGGGG CCTTGTTGAT GCGACAGCGG 
GCTTTTCGCA AAGCACCAGG ATTAGTTACT GATGGGCGAG ATATGGGAAC AGTGGTGTTT 
CCAGAGGCGG ACTTAAAAAT TTTTCTTACT GCCAGTCCAT ATGAGCGGGC GCGAAGGCGT 
TATAAGCAGT TGAAGGAAAA AGGCATAGGT GCTAATCTAA AAAATTTAGA GAAAGAAATC 
GCTGAACGGG ATAGGCGCGA TTGCGAACGT AATATTGCTC CGCTCAAATC GGCTGATGAT 
GCTATAATAC TAGATTCTAC AAACCTTGCT ATTAAGGAAG TATTTCAGCA AGTGTTACCA 
TGGTTGTCAG GAAAAAATAC GTAA
 
Protein sequence
MSKEIPVITV DGPSGSGKGT LAQQLAQHLE WHYLDSGAMY RVLALAADKH GIAPNAPKQL 
ETLAQNLDVR FISGLEGMPA RVFLEGSEVS DSIRREECGN AASKIAALAE VRGALLMRQR 
AFRKAPGLVT DGRDMGTVVF PEADLKIFLT ASPYERARRR YKQLKEKGIG ANLKNLEKEI 
AERDRRDCER NIAPLKSADD AIILDSTNLA IKEVFQQVLP WLSGKNT