| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0178 |
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| Symbol | |
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| ID | 3706211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 198046 |
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| End bp | 198738 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637736695 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_342241 |
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| Protein GI | 77163716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000756614 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCTT ATAAACTCAT AGTTTTCGAT TGGGACGGAA CTTTAATGGA TTCGGAAGCG
CGTATTGTGG CGAGTATGCG TTCTGCGATT CATGATCTTA GCTTCCCTTT TCGGGAAGAC
GCGCAGCTGC GTAATGTGAT TGGCCTGGGC TTGCCAGAAG CTTTGGCTAT GCTTTATCCA
GAGGGGGATA AAGTGATGAA AAATGCTTTG GTTGAGCGCT ATCGTCATTA TTATTTGAGT
GCCGATTTAA CCCCTAGCCA GCTCTTTGAG GGAGTTGAGG AATTATTAGG AAAATTGCAC
GAGCAGGGTT ATTTAATGGC TATTGCTACG GGTAAGGGGC GTAGCGGCTT GGATCGGGTA
TTACCGGAGG TAGGTGTTGC CCACTATTTT TGCACCAGCC GCTGCGCCGA TGAGACGGCC
TCGAAGCCTA ACCCCCGCAT GCTATTGGAG ATTATGGCGC AAACCCAGGC TAGGCCTGAA
GAGACCCTGA TGGTTGGCGA CACCGAATAT GACCTGCTGA TGGCCAAATA CGCGGGAACC
GATGCTTTAG CGGTAAGCTA TGGCGTACAT GAAAAAACCC GCCTGCAACA ATGTGGCCCT
ATTGGCTGCG TTGATTCAGT CACAGCTTTA GAGGGTTGGT TGTCAGCAGG ACCAGCTTAC
GCTGCGCGTA ATGCAAGCTG TCGGCACGGC TAA
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| Protein sequence | MSPYKLIVFD WDGTLMDSEA RIVASMRSAI HDLSFPFRED AQLRNVIGLG LPEALAMLYP
EGDKVMKNAL VERYRHYYLS ADLTPSQLFE GVEELLGKLH EQGYLMAIAT GKGRSGLDRV
LPEVGVAHYF CTSRCADETA SKPNPRMLLE IMAQTQARPE ETLMVGDTEY DLLMAKYAGT
DALAVSYGVH EKTRLQQCGP IGCVDSVTAL EGWLSAGPAY AARNASCRHG
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