Gene Noc_0157 details

Gene Information

• Locus tag: Noc_0157
• ID: 3706190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 169291
• End bp: 169908
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637736674
• Product: HylII
• Protein accession: YP_342220
• Protein GI: 77163695
• COG category: [R] General function prediction only
• COG ID: [COG1272] Predicted membrane protein, hemolysin III homolog
• TIGRFAM ID: [TIGR01065] channel protein, hemolysin III family

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAG GTGAGAAGTT TAACAGTATC AGTCACCTCG TAGGCGCAGT AGCAGCACTC 
GCAGGTTTAG TGGTGCTGGT AGTGTTGGCA GCACGCCAGG GTGATCCATG GAAGATCGTC 
AGTTTCAGCA TCTACGGCAC GACCTTATTT TTATCTTATC TTGCTTCCAC CCTTTATCAT 
GGCTCCGAGG GTAAGATTAA GCATATCTTC CGCAAGCTTG ATCATCATAC CATTTACCTG 
CTGATTGCCG GAACTTACAC TCCTTTCACT TTAGTCACGT TACATGGCCC CTGGGGCTGG 
TCGTTATTTG GCATTATTTG GGGGCTGGCT GTTTTTGGGA TGGTGGTGGA CTCTCTACCG 
CACAAGGGAC ATAGAATACT CCCCGTTGCT ATTTATCTCC TGATGGGCTG GCTTGTTCTG 
GTCGCATTGG TTCCTCTATT GCAGGCCCTG CCTTTTGCAG GCTTTATTTG GCTTTTGGCG 
GGCGGGCTAT TTTATACGGT TGGCGTTATT TTTTATGCTT TAGATAAGAA GTTATCCTAT 
GCCCATGGTC TCTGGCATTT ATTCGTATTG GCAGGTGGTC TCACCCACTA TCTAGCGATA 
TTCTTTTATG TAGTATAG 

 

Protein sequence

MQEGEKFNSI SHLVGAVAAL AGLVVLVVLA ARQGDPWKIV SFSIYGTTLF LSYLASTLYH 
GSEGKIKHIF RKLDHHTIYL LIAGTYTPFT LVTLHGPWGW SLFGIIWGLA VFGMVVDSLP 
HKGHRILPVA IYLLMGWLVL VALVPLLQAL PFAGFIWLLA GGLFYTVGVI FYALDKKLSY 
AHGLWHLFVL AGGLTHYLAI FFYVV