| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0152 |
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| Symbol | |
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| ID | 3706185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 161918 |
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| End bp | 163066 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637736669 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_342215 |
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| Protein GI | 77163690 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATT CTAATGCCAT GCAAGTGTTT GTCCTTGCCC TTGTCTTCAG CCTCGTGTTG
TTTCCCTCTT GCTTGGTTGC CGAGGGGCCA AGTCCTTCCC TTGATAGCGC TAACACTATC
GAGGTCTCTG ATATACTGGC CCAGCAGCTC AAGGTCAGGC CAGTGGGGCA CGGTCGTGTC
CGGGATACGC TGCGTTTGCC GGGCCGTGTC CAGCTTGATG AGCAACGCCT GGCGCGGATT
GGGGCTTCCG TTACTGGCCG GATCACCGCG CTGTACGCTA TTTTGGGCCA GGAAGTACAG
CGGGGCGATA TTCTGGCTGA GCTTAACAGC ACCGAACTTG GAGCGGCGCA GGCCGCCTAC
CTTAAAGCTT CCTCCCAAGT CAGTTTGCGT AAATTAGCGG TTAGCCGGGC CCAACGCCTG
CTGGCCGGGG ATGTGATTGG CTCCGCCGAA CTCCAGGAAC GGGAAGGTGA ACTCGTTGCA
GCCGAGGTAG AAATGCAGGC AGGAGCTGAC CAGCTCCGGG TGCTGGGAAT GAGCGACAGA
AGTATCAAGC AGCTCACCCG TAATGGGCAA ATTGATTCTC ACTCCCATAT TACCGCGACC
CTAAGTGGCA CGGTGATCGA CCGGCGCATC AGCCTTGGGC AGGTCGTGCA ACCCTCGGAT
ACGCTTTATA CGATTGCCGA TCTTTCCCAT GTATGGTTAG TGGCTCAAAT CCCGGAGAAC
CAAGCTTACT TGGTTCAGGA GGGCCAGGAG GCAGAAGCGG AAATACCAGC TCTGCCTGGC
CCCTCAGCCA CAGGCCAGCT TATTTATGTT GCCGATGTGG TGGACCCGAA TACCCGCACC
GTTACGATGC GAATGGATGT TCCTAATCCC CAGGGGCAAA TTAGACCCAA TATGCTGGCC
TCAATAGTTA TTCATACCCG AGCCGCGCCT GAACTCGTGG TTCCAGCTCA AGCTATCGTG
CGCCAAGGCA GAGAGGATTT CATTTTCGTG CAGAGCGATC CTCGGCATTT CACGCTTCGC
CCCGTTAAGT TAGGTCCTAA TGGAGGCGAA TTTCGAGGGG TAGTGAGCGG ATTAACAGTC
GGTGAACCTA TTGTAGTGGA AGGGGCTTTT CACTTAAATA ACGAGCGCTT GCGCCGCAAT
TTGGATTAG
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| Protein sequence | MFNSNAMQVF VLALVFSLVL FPSCLVAEGP SPSLDSANTI EVSDILAQQL KVRPVGHGRV
RDTLRLPGRV QLDEQRLARI GASVTGRITA LYAILGQEVQ RGDILAELNS TELGAAQAAY
LKASSQVSLR KLAVSRAQRL LAGDVIGSAE LQEREGELVA AEVEMQAGAD QLRVLGMSDR
SIKQLTRNGQ IDSHSHITAT LSGTVIDRRI SLGQVVQPSD TLYTIADLSH VWLVAQIPEN
QAYLVQEGQE AEAEIPALPG PSATGQLIYV ADVVDPNTRT VTMRMDVPNP QGQIRPNMLA
SIVIHTRAAP ELVVPAQAIV RQGREDFIFV QSDPRHFTLR PVKLGPNGGE FRGVVSGLTV
GEPIVVEGAF HLNNERLRRN LD
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