Gene Noc_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0123 
Symbol 
ID3706155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp130896 
End bp131627 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID637736639 
Producthypothetical protein 
Protein accessionYP_342186 
Protein GI77163661 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.138366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTC CCCGTGTCTA TTTTCCCTTG TCCTTATCGA TAGGCTCTAG CGTATCCCTA 
GATGAGCGGG CTTTGCAGTA TGTAATCCGA GTGCTGCGCC TTAGGCTCGG CGCCCAATTG
CGGTTATTTG ATGGCCGAGG TGCCGAGTAT CAGGCGGTGC TGGAGACAAT AGAGAAGCGG
GCGGTTAAAG TACGGATTTT AGAACGTATC GAGCATCATG TTGAATCGCC TTTGCATATT
ATTTTAGGGC AGGGGATCTC TCGGGGTGAG CGCATGGATT ATGCGCTGCA AAAGGCCGTG
GAACTAGGGG TCAGTCGTAT CATCCCATTG CTTACTGAGC GTAGTGCTGT CAATTTATCT
GCAGAGCGTG CCGAGAAACG GCTACGCCAT TGGCAGGGGG TTATTATCAG TGCTTGTGAG
CAATGTGGCC GCAATTATAT CCCTCCGGTG GATACACCTC GGCCGCTAGC GGATTTTCTT
AGGGACGACC ATAGGGGGCT GGCTGTGTTA TTGGATCCCC GGAGCAGGCG GCCATTGAAG
GCGTTACCTT TGCCTTTGGA TAACCGGCTA ATAGTGTTGA TTGGTCCGGA AGGGGGATTG
AATAAGGGAG AGGCTAAGCA GGCACAACAG GCTGATTTTA TTGGTGTCTG TCTTGGACCT
CGTATTTTAC GGACCGAGAC GGCTACAGTA GCGGCGCTGA CGGCGCTGCA GCTACTCTGG
GGAGACTTAT AA
 
Protein sequence
MRVPRVYFPL SLSIGSSVSL DERALQYVIR VLRLRLGAQL RLFDGRGAEY QAVLETIEKR 
AVKVRILERI EHHVESPLHI ILGQGISRGE RMDYALQKAV ELGVSRIIPL LTERSAVNLS
AERAEKRLRH WQGVIISACE QCGRNYIPPV DTPRPLADFL RDDHRGLAVL LDPRSRRPLK
ALPLPLDNRL IVLIGPEGGL NKGEAKQAQQ ADFIGVCLGP RILRTETATV AALTALQLLW
GDL