Gene Noc_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0032 
Symbol 
ID3705965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp32678 
End bp33424 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content48% 
IMG OID637736556 
Productrhodanese-like protein 
Protein accessionYP_342104 
Protein GI77163579 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCA CTCGCCTTTT CGAATTTCTT ACCAACCACT GGACGTTGTC ACTGTTGCTT 
GTAGTTATTT TGCTTGCATT GGTTATTGAT CCACTGCTAC GCCGGCTACG CGGGATTAGA
ATGGCGTCCG CGGTTGAAAT TACGCGATTG ATCAATCAGG AAAACGCTCA AGTCGTTGAT
ATCCGGGAAG AGAAGGAATT TGAAAAAGAG CATATTCTTG ATTCTTTGAA CGTTCCTTTC
TCTAAATTTT TTAAGCGTTT AGACGGTTTG GGAGATTTTA AGGGCCGTCC CTTGGTGGTG
ATATGGGGGA TGGGGCAGCG AGCATTGTAT GTTGCTGGAA AGCTGAGTCG GCAAGGTCAT
AAGACTATTT ATGTGCTCCA TGGTGGAATC GAAGCTTGGA AGCAGGCAAA TATGCCTTTG
TTTAGTGGTA GCACTAAAAT CAAAGCAAAG GCTCAGACCG AAGCACCTGC TCAAACCGAA
GCACCTGCTC AAACCGAAGC ACCTGCTCAA ACCGAAGCAC CTGCTCAAAC CGAAGCACCC
GCTCAAACCG AAGCACCCGC TCAAACCGAA GCACCCGCTC AAACCGAAGC ACCCGCTCAA
ACCGAAGCAC CCGCTCAAAC CGAAGCACCC GCTCAGACCG ATGCACCCGC TTGGACCGAA
GCCGGCAATA AGCCTAGAAT TAGCAAAAAT ACTAACGGCA ACAAAAAGTC TAAGAGGCGC
AAAAAGGCAA AGACTAGAAG GAGTTAA
 
Protein sequence
MDTTRLFEFL TNHWTLSLLL VVILLALVID PLLRRLRGIR MASAVEITRL INQENAQVVD 
IREEKEFEKE HILDSLNVPF SKFFKRLDGL GDFKGRPLVV IWGMGQRALY VAGKLSRQGH
KTIYVLHGGI EAWKQANMPL FSGSTKIKAK AQTEAPAQTE APAQTEAPAQ TEAPAQTEAP
AQTEAPAQTE APAQTEAPAQ TEAPAQTEAP AQTDAPAWTE AGNKPRISKN TNGNKKSKRR
KKAKTRRS