Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0019 |
Symbol | |
ID | 3705952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 12438 |
End bp | 14861 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637736543 |
Product | DNA gyrase, B subunit |
Protein accession | YP_342091 |
Protein GI | 77163566 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCA GCACTGCCTA CGACTCATCT CATATTAAAG TTCTGAAGGG CCTGGATGCC GTTCGTAAAC GCCCTGGTAT GTATATTGGT GATACCGATG ATGGCACCGG TCTCCATCAT ATGGTGTTCG AAGTTGTGGA TAATTCTATC GACGAGGCCC TGGCAGGGTT TTGTAATGAG ATTAGCATCA TTATACATTC TGATGATAGC ATTACTATCT CTGATAACGG ACGGGGTATC CCAACCGATA TTCACCAAGA AGAAGGGCGA TCTGCAGCGG AGGTCATTAT GACTGTACTG CATGCTGGTG GGAAATTTGA CCATAACTCC TATAAAGTTT CTGGTGGGTT ACATGGGGTA GGCGTATCAG TCGTTAATGC TCTTTCTGCC GTTCTTTTTT TAGAGATTCA CCGCGACGGG AAAATATACC AGCAGCACTA CCAAGAGGGT GTCCCACAGG GGCCTTTAGT CGCTGTCGGT ACCACAGAGC GTAGCGGTAC AACGATTCGG TTTTCGCCAA GTCCCAAAAT TTTTTCCAAT ATTGTCTTTA GTTTCGATAT TTTTGCAAAG CGACTGCGAG AATTAGCTTT TCTTAATTCT AGAGTCCGTA TTTTATTGGA AGATGAGCGT ATCGGGCGAA AAGAAGAGTT TTTTTATGAG GGGGGGATAA GTGCTTTTGT AGAACATCTC AATAAAAATA AAACTCCACT CCACGGAAAC GTTTTTTATT TCCAAGGAGA ACGTGATGGG GTTGCCGTGG AACTTGCAAT GCAATGGAAT GATTCTTATC AGGAGCATTT TTTTTGCTTT ACCAATAATA TTCCACAAAG AGATGGGGGT ACTCACTTGG CTGGCTTTCG ATCCGCCCTG ACTCGAACTT TGAATCAGTA TATTGAGAAA GAAGCATTAG CCAAAAAAAC CAAGGTCGGT ACGACTGGCG ATGATGCTCG AGAGGGACTG ACTGCGGTTC TCTCTATAAA AGCGCAAGAT CCAAAGTTTT CTTCTCAGAC TAAGGAAAAA TTAGTGTCCT CTGAGGTTAA ACCAGTGGTT GATAGCTTAG TCTCAGAACA TTTTCAAAAT TTTTTGCTGG AGCATCCCGT TGACGCCAAG GCTATTGGCG GCAAGATGAT AGAGGCTGCT CGAGCCCGAG AAGCAGCCCG CAAAGCTAGA GAGTTAACTC GCCGGAAGGG GGCTTTGGAT ATGGCAGGGT TACCCGGAAA ATTAGCGGAC TGTCAGGAAC GGGATCCAAC TTTATCTGAA TTGTTTTTGG TAGAAGGGGA TTCAGCAGGT GGATCTGCTA AGCAAGGGCG TGATCGTCGA AACCAAGCCA TTCTTCCTCT TAAAGGAAAG ATCCTTAATG TGGAGAAAGC TCGTTTTGAC AAAATGCTGA GTTCTGTAGA AGTCGCTACT CTCATTACGG CCTTAGGGTG CGGTATTGGC CGAGAAGAAT ATAATCCCGA TAAACTACGG TATCATCGGA TTATTATCAT GACGGACGCT GATGTAGATG GATCCCATAT ACGCACGCTG CTATTAACTT TTTTTTATCG CCAGATGCCG GAGCTGGTAG AGCGGGGTCA TATTTATATT GCTCAACCTC CTCTTTATAA GGTTAAACGG GGTAAGCAAG AGCAGTATAT TCGGGATGAT GCCGAGATGG AACGCTATTT GATTAATTTA TCTACTGACA ATGCAAAAAT CTATTCCGAG AATGGAGCAA CTTCTATAGC AGGAGAAACA CTATCGACCT TATTTACTGA TTATTTCCAG TTGAGGCGTG CTATCGAGCG ATTATCTTAT CGTTATGATC CTTTATTGCT TGATCAAATG TTATACCTTG ATGTAGTACC TACCCCCGCT GATCCAATGA TAGAAATTAA GCAATTAGAG GAATGGGCTA CCCAGTTGGA GATTAGAAGT AATAGCGCAG CCAAAGGAAA TGCCCGTTAT GAAATTGAAG TAGCCACGGT ACCTGAGAAT TCTGCACCCG TGCTCCAAGT AAAGATTACG CGCCATGGGG TAACCGCCTA TCAGCGTATT TATATGGATT TTTTTACTTC CCCAGACTAT CAACGCATTC AAAATTTAGG GAAACGCTTA GTTAATTCCG TTAAAGCGGA AAGCTACGTT CAACGAGGTG ATAGGCGACA ATTAGTAAAT GATATCCAAG AAGCAGTCGA CTGGTTGATG GAGGAAGCAA GACGGGGCCA AGCCGTGCAA CGCTATAAAG GTCTTGGGGA GATGAATCCA GATCAATTAT GGGAAACTAC AATGAATCCT GCTACACGGC GCCTTAGCCA GGTTCGAATC GATGATGTTA TTACGGCAGA TGAAATATTT ACTACTTTGA TGGGAGATCA TGTGGAACCT CGGCGGGACT TTATTGAGTC CCATGCGCTA AGTGTAGCTC ATCTCGACGT TTAA
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Protein sequence | MKASTAYDSS HIKVLKGLDA VRKRPGMYIG DTDDGTGLHH MVFEVVDNSI DEALAGFCNE ISIIIHSDDS ITISDNGRGI PTDIHQEEGR SAAEVIMTVL HAGGKFDHNS YKVSGGLHGV GVSVVNALSA VLFLEIHRDG KIYQQHYQEG VPQGPLVAVG TTERSGTTIR FSPSPKIFSN IVFSFDIFAK RLRELAFLNS RVRILLEDER IGRKEEFFYE GGISAFVEHL NKNKTPLHGN VFYFQGERDG VAVELAMQWN DSYQEHFFCF TNNIPQRDGG THLAGFRSAL TRTLNQYIEK EALAKKTKVG TTGDDAREGL TAVLSIKAQD PKFSSQTKEK LVSSEVKPVV DSLVSEHFQN FLLEHPVDAK AIGGKMIEAA RAREAARKAR ELTRRKGALD MAGLPGKLAD CQERDPTLSE LFLVEGDSAG GSAKQGRDRR NQAILPLKGK ILNVEKARFD KMLSSVEVAT LITALGCGIG REEYNPDKLR YHRIIIMTDA DVDGSHIRTL LLTFFYRQMP ELVERGHIYI AQPPLYKVKR GKQEQYIRDD AEMERYLINL STDNAKIYSE NGATSIAGET LSTLFTDYFQ LRRAIERLSY RYDPLLLDQM LYLDVVPTPA DPMIEIKQLE EWATQLEIRS NSAAKGNARY EIEVATVPEN SAPVLQVKIT RHGVTAYQRI YMDFFTSPDY QRIQNLGKRL VNSVKAESYV QRGDRRQLVN DIQEAVDWLM EEARRGQAVQ RYKGLGEMNP DQLWETTMNP ATRRLSQVRI DDVITADEIF TTLMGDHVEP RRDFIESHAL SVAHLDV
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