| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_D2817 |
|---|
| Symbol | |
|---|
| ID | 3786800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007617 |
|---|
| Strand | + |
|---|
| Start bp | 3427 |
|---|
| End bp | 4659 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637812909 |
|---|
| Product | plasmid replication initiator protein-like |
|---|
| Protein accession | YP_413496 |
|---|
| Protein GI | 82703933 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5534] Plasmid replication initiator protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.03841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCTG ACAAGAACGA TGGGCCAAAA TCCAAAGTAA CTATGGCTTA TGCCTTGGAA
TTGGTAGAGA TCGAGGAGCA ATTGGCAGCG CTGGAGCGTA CGAATCAACG TCTCCAAGCA
ATGGCCGAGC GATCCTCGAA CAATCCTGAT CTTGAGCGCC GCAGAAATGA AATTATCGAC
AAAGCAGCTC CGTTAGAACG ACGTAGACAA GCAATCATTG CTGCGGAAGA GGCTGCCGCG
GAAGTTTATG TCATGCACGG AGAAACTAGA TCTACTCCTA ACTTATTTAG CGACATTCAG
CCTGAATTAG GTTTCTTGGC CGATATTCAG AGCGAGGTCA AAAAAGTCGA AGAGGATAGG
AGCAAAAAGC GGGAACGATC CAAGCTACTG CCAGCTCGTT ACACAAATCA GGATTTCTTT
GTTGCAGATA TCCTCGGCTA TTCGCTCAAG GACGACCACG CCACAATGGA GGCCCCCGTT
TTTTCACTTA AGACTCAGAA AGATCTCACT CCTTGGGAAT GGACAAGTAA AGACGGTACA
AAGCACATCG AGGTATCGCC TTCGGTCAAA TATGGGCGAG CTACCCAGCA TGACAAGGAT
ATTTTGATCT TTGTTACCTC GCAAATGACG GAAGCCCTGA ATCGTGAGCG GCCAGACACC
CAAAGTCGGG CCGTGCGTTT TACCGTACAT AATTATCTCG TGGCAACCAA CAAACCTACA
GGGGGGGTGG AATATCAACG ACTTGAACGA GCACTGGATA GACTCAAGGG AACAACGATT
AAAACCGACA TCAAGACTGG TAACAAGCGC GTTAAAGAAG CATTTGGCAT TCTCGATTCT
TGGGCAATCA TTGAGCGTTC GTCAAGTGAT GAACGCATGA TTGCTGTTGA AATCACCTTA
TCCAAGTGGC TTTATAACGC AATCCACGCA CACGAAGTGC TAACGATCCA TCCTGACTAT
TTTCGGTTAC GCAAACCCTT GGAGAGGCGT TTATACGAGT TAGCCAGAAA GCACTGTGGC
AGCAAGCAGT CAAGCTGGAA AATCGGACTT GAATTACTAC GGGAGAAGTG TGGGGCGCAG
AGTCACATCC GCGCCTTCCG AAATCAGGTA CAGGAGATCA GTAATGCTCA TACACTGCCT
GAATACCACT TGATCTACGA GCGGGAAGCA GATCAAGTTA CTTTCTACGT TAAAAATCAA
CAGAAGCTCA TCTCTTCTTA TTTATGTCGC TGA
|
|---|
| Protein sequence | MVSDKNDGPK SKVTMAYALE LVEIEEQLAA LERTNQRLQA MAERSSNNPD LERRRNEIID
KAAPLERRRQ AIIAAEEAAA EVYVMHGETR STPNLFSDIQ PELGFLADIQ SEVKKVEEDR
SKKRERSKLL PARYTNQDFF VADILGYSLK DDHATMEAPV FSLKTQKDLT PWEWTSKDGT
KHIEVSPSVK YGRATQHDKD ILIFVTSQMT EALNRERPDT QSRAVRFTVH NYLVATNKPT
GGVEYQRLER ALDRLKGTTI KTDIKTGNKR VKEAFGILDS WAIIERSSSD ERMIAVEITL
SKWLYNAIHA HEVLTIHPDY FRLRKPLERR LYELARKHCG SKQSSWKIGL ELLREKCGAQ
SHIRAFRNQV QEISNAHTLP EYHLIYEREA DQVTFYVKNQ QKLISSYLCR
|
|---|
| |