Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A2352 |
Symbol | |
ID | 3785289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 2678925 |
End bp | 2679866 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637812443 |
Product | type II secretion system protein |
Protein accession | YP_413035 |
Protein GI | 82703469 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0836815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACCTG TGCAAATCGC CTACCTGGCG GTGATTTTCA TCGCGGTGGC CGGAGCCGCG TTCGGGGTGA TGCGGGCGCT GGCGCCGCGT CCCACCAAAA CCCGCCTCGA GCAGGTGGCC GCGGGGAACT CCCCCTCGCA GCAGAAGGCC GGGGACGGCT GGGAACGGAC CATGGTCAAT CTGGCGGGTC CGCTGGCCAA GCTGGCCCTC CCCAGCGAGG GCTGGGAAAC CTCGGTGCTG CGCACGCGCT TCATGCACGC GGGCTACCAT GCGCGCTCCG TGCCCATGGT GTATTTCGCG GCCAAGACAG GGCTGGCGCT GGCGTTACCG GCGATTTTCC TGCTTTACGT CGGCATCGGC CGCCTGGAGC TGGATGTCAA TGCCGCCCTG TTCGCCCTGC TGAGTCTGGC GGCATTCGGC TATTACCTGC CCAACCTGGT GCTGGGGCGC CTGGTTTTAC AGCGCAAACG GGAGCTGTTC GAGAGTTTTC CGGATGCCAT CGATCTCATG ACAGTATGCG TTGAAGCGGG ACTGGGATTG GATGCCGCCA TGGTGCGGGT GGCGGAAGAA ATGCGCCTTC GGAGCAAGGC CCTCGCCAGC GAGCTTCACC TGGTAAGCCT GGAGCTGCGC GCCGGCAGGA CGCGGGAGCA GGCGCTGCGC AACCTTGCCA TGCGCACCGG CGTCGAAGAA ATCGAGGCCC TGGTTTCCAT GCTGGTCCAG GCCGACCGCT TCGGCACCAG TGTCGCCGCT TCCCTGCGCG TCCATTCAGA TACGCTGCGC ACCACCCGTC GGCTACGGGC GGAAGAAGCT GCGGCCAAAA TCGCGCTCAA GCTGCTCTTT CCGCTGATTT TCTTTATCTT CCCGTCACTC CTGCTGGTGC TGATGGGGCC GGCTTTCATC AACATCTATC GGGTGCTGCT CCCCACTCTC GGGGGTCAGT AA
|
Protein sequence | MTPVQIAYLA VIFIAVAGAA FGVMRALAPR PTKTRLEQVA AGNSPSQQKA GDGWERTMVN LAGPLAKLAL PSEGWETSVL RTRFMHAGYH ARSVPMVYFA AKTGLALALP AIFLLYVGIG RLELDVNAAL FALLSLAAFG YYLPNLVLGR LVLQRKRELF ESFPDAIDLM TVCVEAGLGL DAAMVRVAEE MRLRSKALAS ELHLVSLELR AGRTREQALR NLAMRTGVEE IEALVSMLVQ ADRFGTSVAA SLRVHSDTLR TTRRLRAEEA AAKIALKLLF PLIFFIFPSL LLVLMGPAFI NIYRVLLPTL GGQ
|
| |