| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1936 |
|---|
| Symbol | |
|---|
| ID | 3784232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 2225075 |
|---|
| End bp | 2227261 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637812022 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_412623 |
|---|
| Protein GI | 82703057 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.547314 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC GAAAAATCCT CGTCACCTCG GCCCTCCCTT ATGCCAACGG CAGCATCCAT
CTCGGCCATC TGGTGGAGTA CATCCAGACT GACATCTGGG TTCGTTTCCA GAAAATGCAA
GAGCACGAGG TCCATTATGT TTGCGCCGAC GACGCACATG GCACGCCGAT CATGCTTCGC
GCAGAACAGG AAGGCATCAC TCCGCGACAG CTGATAGACC GCGTATGGCA TGAGCATAAG
ACGGATTTCG ATGGTTTCCA TATTGGCTTC GATCACTATT ACACTACCGA TTCGCCCGAG
AATCAGGCGT TTTGCGAAGA TATCTACCGT CAGCTCAGGG CAGGGGAGCT GATTGCCAAA
CGTTCGGTGG AACAGTTTTA TGATCCGGTC AAGCAGATGT TTCTGCCGGA TCGGTACATC
AAGGGCGAAT GCCCCAGATG TCATGCCGGA GACCAGTATG GAGATTCCTG TGAGGCTTGC
GGAGCCACCT ATCTGCCAAC CGACCTGATC AGTCCCTACT CTGCCGTCTC CGGCGCCCGA
CCGGAGCGCC GCACTTCGAA TCACTATTTC TTCAAACTTT CGGATGTGCG TTGCGAGGCT
TTCCTCAAAA ACTGGATTTT TGAATCCATC CCGGCTCAGC CCGGCGTCGC CTTGGAAACG
AGACCGCGAC TTCAACCTGA AGCTGCCAAT AAAATGAACG AGTGGCTTTC AGCGGGTCTC
GTGGACTGGG ATATCTCGCG GGATGCGCCC TATTTCGGCT TCCCTATTCC ACGTACCGGC
GGAAAGAAAT TTTTCTATGT CTGGCTGGAT GCGCCGGTCG GTTATTTCGG CAGTTTCAAG
AATTACTTCA AGCAGAACCA GCGAACCCAG GCCGAGATCG ATGAATTCCT CCGTCCTGGT
GGCAATACGG AAATGGTGCA TTTCATAGGG AAGGATATTC TCTACTTTCA CGCCCTGTTC
TGGCCGGCGA TGCTGGAATT CTCGGGATAT CGCACCCCTA CTCAGATTTA TGCTCACGGG
TTTCTAACCG TCAACGGCCA GAAAATGTCC AAATCCAGGG GGACTTTCAT CACTGCTGAG
AGCTATCTGA AGCAAGGACT GAATCCGGAA TGGTTGCGTT ATTACTACGC TGCCAAACTC
AACGACAGCA TGGAGGATAT CGATCTCAGC TTCGAGGATT TTGTCGCGCG CGTGAACAGC
GATCTGGTAG GGAAATATGT CAATATCGCC AGCAGATGCG CAGGGTTCAT CACCAAAAAA
TTCGGGGGCG AGCTTACACA CAATGTTTCG GAAGCGAGCC GGAAATGGTT CAATCAGTTT
CTTTTTTGCG AACTGGGAGA GGGAGATACT TTTCTCGGCC GTCATATGTC CATCGCAAAT
TTCTATGAAC GCAGGGAGTA CAGTAAAGCG ATCAAGGAAA TCATGTCGGC GGCCGATGTG
GCCAACCAAT ATGTGGATCG GATGAAACCC TGGGTACTGG CGAAAGACAG CAGGAACGAC
AGGGAATTGC ATGAAGTATG CAGCGTCGCG TTGAATATGT TCCGGATGCT GACGGTGTAT
CTGAAACCTG TGCTGCCGAA GCTTGCAATG GAAGCGGAGC AGTTCCTGGG ACTAGATCCT
CTTACATGGA AGGATGCAAA CTCGCAGCAC AGGTTATTGC CGGACGGACA TCGGATCAAT
GATTACCAGC ACTTGATGAC CCGGATCGAT CCGAAGCAGA TCGAAATGCT TACCCATGCA
AACAAGGAAA GCCTGGCACC CGCAAAGTCA CAGCAGGTTG CACAAGCTGT AGAAACCATG
GAAAAAAACT CTTCCACCAC ACCCGCCCCG GCAAAAGAAG GAGAAGCAGG CCAAGCCAGC
GCGTCGACCA TCTCCATCGA GGATTTCGGC AAGATTGATC TCAGGGTCGC GAAAATCCTC
GATGCGGAGC ACGTGCCGGG CGCCGACAAG CTGCTCAAGC TAACCCTGGA TGTCGCTTCG
GAACAGCGAA CAGTATTTGC AGGCATAAAA TCAGCTTATG ATCCCGGACA GCTCAAGGGA
CGCCTCACGG TCATGGTTGC CAACCTCGCA CCGCGCAAGA TGAAATTCGG TATATCCGAA
GGAATGGTAC TGGCTGCGGG AGACGGTGAA GGCCCTTATC TGCTTTCTCC CGATGAAGGT
GCGCGCCCCG GAATGAAGGT GAAATAA
|
|---|
| Protein sequence | MNKRKILVTS ALPYANGSIH LGHLVEYIQT DIWVRFQKMQ EHEVHYVCAD DAHGTPIMLR
AEQEGITPRQ LIDRVWHEHK TDFDGFHIGF DHYYTTDSPE NQAFCEDIYR QLRAGELIAK
RSVEQFYDPV KQMFLPDRYI KGECPRCHAG DQYGDSCEAC GATYLPTDLI SPYSAVSGAR
PERRTSNHYF FKLSDVRCEA FLKNWIFESI PAQPGVALET RPRLQPEAAN KMNEWLSAGL
VDWDISRDAP YFGFPIPRTG GKKFFYVWLD APVGYFGSFK NYFKQNQRTQ AEIDEFLRPG
GNTEMVHFIG KDILYFHALF WPAMLEFSGY RTPTQIYAHG FLTVNGQKMS KSRGTFITAE
SYLKQGLNPE WLRYYYAAKL NDSMEDIDLS FEDFVARVNS DLVGKYVNIA SRCAGFITKK
FGGELTHNVS EASRKWFNQF LFCELGEGDT FLGRHMSIAN FYERREYSKA IKEIMSAADV
ANQYVDRMKP WVLAKDSRND RELHEVCSVA LNMFRMLTVY LKPVLPKLAM EAEQFLGLDP
LTWKDANSQH RLLPDGHRIN DYQHLMTRID PKQIEMLTHA NKESLAPAKS QQVAQAVETM
EKNSSTTPAP AKEGEAGQAS ASTISIEDFG KIDLRVAKIL DAEHVPGADK LLKLTLDVAS
EQRTVFAGIK SAYDPGQLKG RLTVMVANLA PRKMKFGISE GMVLAAGDGE GPYLLSPDEG
ARPGMKVK
|
|---|
| |