| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A1865 |
|---|
| Symbol | nusA |
|---|
| ID | 3786515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | - |
|---|
| Start bp | 2151210 |
|---|
| End bp | 2152697 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637811951 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_412552 |
|---|
| Protein GI | 82702986 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.253606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG AGGTTTTGCT ATTGGTGGAT GCACTGGCGC GCGAAAAGAA TGTGGAAAAG
AACATTGTTT TTGCCGCACT TGAGCTTGCA TTGGCGTCCG CCACGAAAAA GCGTTTTAAC
GAGGACGCTG ACGTGCGCGT GTCGATCGAC CACCAGACAG GGGACTATCA ATCCTTGCGC
CGCTGGCAGG TGGTGGCCGA CGATGCAGTG GAGGATCCCG CTCGTCAGAT ATCGCTGAGC
GAGGCCTTTC GGCAAAATCC TGAAATCCAG CTCGACGAAT ATATCGAAGA AATCCTGGAG
CCGGTGGAAT TCGGGCGCAT CGGCGCCCAA GCGGCGAAAC AGGTGATATT CCAGAAAATC
CGTGATGCCG AACGCGAGCA GATCCTGAAC GATTTTCTCG AGCGCAAGGA ATATATGGTT
ACCGGAACCA TCAAGCGCAT GGAACGCGGA AACGCGATCA TCGAATCCGG CAGGGTAGAG
GCCGTATTGC CGCGTGACCA GATGATTCCC AAGGAGAATC TGCGTGTCGG GGACAGAGTG
CGCGCTTACT TGCACAGGAT CGACCGTACT ACGAGAGGTC CGCAGTTAAT CCTGTCGAGA
ATTGTGCCGG AATTTCTGAT AAAGCTGTTT GAGCTGGAAG TGCCTGAGAT CGAGGAGGGC
TTGCTGGAGA TCAAGGTGGC AGCGCGTGAT CCTGGTTCGC GTGCGAAGAT CGCAGTGAAG
TCGAATGATC AGCGAGTGGA TCCGATCGGT ACCTGCGTAG GCATGCGGGG TTCCAGAGTC
CAGGCCGTGA CCGGCGAACT GGCGGGTGAA AGGGTAGACA TCATCCTTTG GTCTGACGAC
CCCGCCACAT TCGTAATCAA TGCGCTGGCT CCTGCCGAGA TCAGCAGCAT TCTGGTGGAT
GAAGAGAAAC ACAGCATGGA CATTGTCGTG GATGAAGGCA ATCTGGCCCA GGCGATCGGA
CGTGGAGGCC AGAATGTCCG GCTCGCCTCG GAATTGACAG GCTGGGAGCT CAACATCATG
ACGATGGAAG AGTCACAGGC AAAAAATGAA GAGGAGTTTT CGGTTTTGCG CCATCTCTTC
ATGGAAAAAC TGGATGTGGA TGAGGAAGTG GCGGACATTC TGGCGCAGGA AGGCTTTACT
ACTCTGGAAG AAGTGGCTTA CGTGCCGCTC AGCGAAATGA TGGAGATCGA AGCATTTGAC
GAACAGACCG TCAACGAGCT TCGCAATCGG GCTCGCAACG CATTGTTGAC CGAGGCCATC
GTGAGCGAGG AAAAGGTGGA GCACATCGCC GAAGACCTGC TCGCGCTGGA AGGCATGGAC
AGCCAGACCG CGCGCGAACT CGCGGCTAAA GGAGTAAGCA CCCAGGAAGA CCTGGCCGAC
CTGGCTGTGG ATGATCTGGT GGAAATGGTC GAGATGGATA CTGAACGGGC CAGGCAGTTG
ATCATGGCGG CACGTGCCCC GTGGTTTGCC CCGGCCGATA GAGCATAG
|
|---|
| Protein sequence | MSREVLLLVD ALAREKNVEK NIVFAALELA LASATKKRFN EDADVRVSID HQTGDYQSLR
RWQVVADDAV EDPARQISLS EAFRQNPEIQ LDEYIEEILE PVEFGRIGAQ AAKQVIFQKI
RDAEREQILN DFLERKEYMV TGTIKRMERG NAIIESGRVE AVLPRDQMIP KENLRVGDRV
RAYLHRIDRT TRGPQLILSR IVPEFLIKLF ELEVPEIEEG LLEIKVAARD PGSRAKIAVK
SNDQRVDPIG TCVGMRGSRV QAVTGELAGE RVDIILWSDD PATFVINALA PAEISSILVD
EEKHSMDIVV DEGNLAQAIG RGGQNVRLAS ELTGWELNIM TMEESQAKNE EEFSVLRHLF
MEKLDVDEEV ADILAQEGFT TLEEVAYVPL SEMMEIEAFD EQTVNELRNR ARNALLTEAI
VSEEKVEHIA EDLLALEGMD SQTARELAAK GVSTQEDLAD LAVDDLVEMV EMDTERARQL
IMAARAPWFA PADRA
|
|---|
| |