Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A1862 |
Symbol | |
ID | 3786606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 2147028 |
End bp | 2147969 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637811948 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_412549 |
Protein GI | 82702983 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.552372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCCAG GTAGCAAACG ACATATCAGC GGCGTGCTGC TGCTCGATAA AGCCTCCGGT CTTTCTTCCA ACCAAGCCCT GCAGACCGCC AAACGCATTT TTTCTGCTCA TAAGGCTGGC CATACCGGTA CGCTTGATCC GATGGCGACC GGTTTGCTGC CCATCTGCTT CGGAGAGGCC ACCAAATTTT CATCGGCGCT CCTCGGTGCA GACAAGACAT ACGAAGCCGT GCTGAGACTT GGCTATATGA GTACGACCGG TGATGCAGAG GGGGAAATTT CAATTGCTGC CGGTATGGAA TCTCAATACG TGGATCTGAC CAGGGAGAAA ATTGAGGCAG TACGCAAAAG CTTTATCGGC GTAATTACGC AAGTGCCGCC CATGTACAGC GCAATCAAGC ATCGTGGGAA ACCCATGTAC ACCTTTGCCA GGGCAGGAGT GGAAATCGAA CGGCAGCCTC GAGCGATAAC GATCCACGAC CTGAGTATCG AGGCGTATCA AGGCAATGAA ATGCGCATCC GGGTGACGTG CGGGAGCGGT ACCTACATTC GCACGCTGGC AGAGGACCTG GGACACGCGC TGGGATGCGG CGGCGCTTAT CTTACTGCAT TGCGCCGGAG CGCACTGGGC GGTTTTGATT TGCCGCAGGC ATACACACTG ACTGGACTCG AAGCTATGCC GCCATCTCAA CGGGACTCTT GCCTGCTGCC AGCCGATAGT CTCCTGAGGT CTCTTCCCCC GGTTGTGGTA GATTCCGCTG CGGCTTTATC TCTGCTCCAG GGACGCGCAA TCCCCGGTAC GCACCCGGCA GGGGAAAGCC TTTTACCGGG AAGACAGGTA CGGTTGTATG ACAAGGCGCA GCGGTTTCTG GGGTTGGGGG AAATTTCAAC GGAAGGTTAC ATCTCGCCGA AAAGACTCAT AAGGTTTGAG CAGTCATTGT GA
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Protein sequence | MSPGSKRHIS GVLLLDKASG LSSNQALQTA KRIFSAHKAG HTGTLDPMAT GLLPICFGEA TKFSSALLGA DKTYEAVLRL GYMSTTGDAE GEISIAAGME SQYVDLTREK IEAVRKSFIG VITQVPPMYS AIKHRGKPMY TFARAGVEIE RQPRAITIHD LSIEAYQGNE MRIRVTCGSG TYIRTLAEDL GHALGCGGAY LTALRRSALG GFDLPQAYTL TGLEAMPPSQ RDSCLLPADS LLRSLPPVVV DSAAALSLLQ GRAIPGTHPA GESLLPGRQV RLYDKAQRFL GLGEISTEGY ISPKRLIRFE QSL
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