Gene Nmul_A1746 details

Gene Information

• Locus tag: Nmul_A1746
• ID: 3786048
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosospira multiformis ATCC 25196
• Kingdom: Bacteria
• Replicon accession: NC_007614
• Strand: +
• Start bp: 1999395
• End bp: 1999997
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637811832
• Product: RNA polymerase sigma factor RpoE
• Protein accession: YP_412435
• Protein GI: 82702869
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family; [TIGR02939] RNA polymerase sigma factor RpoE

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.30228
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGACC GGGAAATCGA TCAGCAACTG GTGGAACGTG CGCAACACGG GGACAAGCAG 
GCCTTCGATC TTCTGGTGAT CAAGTACCAG CGCAAGCTTG CGCGTCTCCT TTCGCAATTC 
ATCAGGGATC CGTCGGAAGT AGAGGATGTG ACTCAGGAGG CCTTCATCAA GGCTTACCGT 
GCGCTACCGT CGTTCCGTGG AGACAGTGCA TTTTATACCT GGTTGTACAG GATAGGCATC 
AATACTGCCA AGAATTTTCT GGTTGCTCAA GGACGGCGGG CGCCTACCAC TACTACAGGA 
TTCGACAGCG AAGAGGCCGA AGGTTTTGAA GAAGCGAGCC AGCTTCGCGA AATGAACACG 
CCCGAGAGCG AACTGACAAG CAAGCAGATC GCTCAAACGG TGAACCAAAC GCTGGAAGAA 
TTGCCTGAAG AACTGCGAAC GGCAATTACG TTGAGAGAAA TTGAGGGACT GAGCTACGAG 
GAAATCGCAG CGATCATGAA TTGTCCTATC GGCACGGTCC GTTCGCGAAT ATTTCGTGCA 
CGGGAAGCAA TAGCGGAAAA ACTGCGCCCC TTGCTGGGGA CTGGTAAAGA TAAGAGGTGG 
TAA 

 

Protein sequence

MGDREIDQQL VERAQHGDKQ AFDLLVIKYQ RKLARLLSQF IRDPSEVEDV TQEAFIKAYR 
ALPSFRGDSA FYTWLYRIGI NTAKNFLVAQ GRRAPTTTTG FDSEEAEGFE EASQLREMNT 
PESELTSKQI AQTVNQTLEE LPEELRTAIT LREIEGLSYE EIAAIMNCPI GTVRSRIFRA 
REAIAEKLRP LLGTGKDKRW