Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A1064 |
Symbol | |
ID | 3784884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 1229215 |
End bp | 1232148 |
Gene Length | 2934 bp |
Protein Length | 977 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637811148 |
Product | ribonuclease |
Protein accession | YP_411759 |
Protein GI | 82702193 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.973146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGCA TGCTATTTAA TGCGACACAG CCGGAGGAAT TGCGTGTCGC TATTGTCGAT GGTCAAAAGC TCATCGATCT CGACATTGAA TCTGCCGGCA AGGAACAACG CAAGAGCAAT ATCTACAAAG CTGTTATCAC CCGTCTTGAA CCGAGCCTCG AAGCCGCCTT CGTCGAGTAC GGGGGGGAGC GGCATGGTTT TCTGCCGTTC AAGGAGATTT CCCGCTCCTA TTTGAAAGAG AGTCCGGACC CTGGGCGGGT CCGAGTCCAG GACGCGCTTC ATGAAGGCCA GGAACTCATC GTCCAGGTGG ACAAGGACGA ACGGGGAACA AAAGGAGCCG CACTTACCAC CTATATCTCG CTCGCGGGCC GTTATCTGGT GCTGATGCCC AATAATCCGC GCGGGGGAGG TGTCTCGCGC CGCATAGAAG GCGAAGATCG CGCCGAACTG CGCGATGTCA TGTCGCATTT GAACATTCCT CAGGGCATGA GCATCATTGC GCGGACGGCG GGGATAGGAC GCACCGAAGA AGAGTTGCAG TGGGACCTCA ACTACCTGCT GCAGTTGTGG CGTGCTATTG AAGATGCTTC CAAAGGCCAG AGCGGTGCTT TCCTTATTTA CCAGGAAAGC AGTCTCGTCA TCAGGGCAAT CCGGGATTAC TTCAATCAGG AAATCGGTGA AATCCTGATT GATACGGAAA GCATCTATGA GCAGGCATGC CAGTTCATGG GTCATGTCAT GCCCGGCAAC GTAGCGCGGG TCAAGCTCTA TCGGGATGAC GTGCCCCTGT TTTCCCGCTT TCAAATCGAG CACCAGATCG AAACCGCATA TTCGCGGCAG GTTACCCTCC CCTCGGGCGG CGCGATCGTG ATCGACCATA CGGAAGCCCT GGTTTCGGTG GACGTAAATT CAGCCCGTGC CACCCGCGGT TCCGACATCG AGCAGACGGC CCTGGCTACC AATCTGGAGG CGGCAGATGA AATTGCGCGG CAACTGCGCC TGCGCGACCT CGGCGGACTT GTGGTCATCG ACTTTATCGA CATGGAAGTC TCCCGCAACC AGCGGGAGGT GGAAAACCGG TTGCACGACG CGTTGCGCTA CGATCGGGCA CGGGTGCAAA TGGGCAAGAT TTCCCGCTTC GGTTTGCTTG AATTATCGCG CCAGCGCCTG CGGCCTTCCC TGGGGGAAAG CAGCTATATT TCCTGTCCGC GCTGCCACGG TACCGGTCAC ATCCGGGGTA CCGATTCCTC GGCGTTGCAT ATCCTCAGAA TCATTCAGGA AGAAGCGATG AAGGAGAATA CGGCAGTGCT GCATGCTCAG GTGCCGGTAG ATGTAGCGAC TTATCTGCTG AACGAAAAAC GGGCGGAAAT TCATGCAATC GAAGCACGCC TGAAAGTAAG TGTCGTTCTG ATCCCCAACA TCCATCTCGA AACGCCCAAT TACAGCATCA CCCGCCTGCG TCATGACGAC GTAAAACTTG GTGAAGTTCA GACGAGTTAC CAGATGGTGG AAAAACCCGC CCAAGATATC CCTCTGCCTT CCAGCGGACA GGAGCCCAAG CCTATGCGGC AGCAGGCAGC GGTACGAGGC ATCACACCGG CACAACCTGC TCCGGTACGC GAGCAAAAAC CGCAGCATGA ACCGGAACCG CTTTCCCTGC TCGATAAAAT ATTCGGCTGG TTTAAACAGG GGGGGGTCGG CGAAAAGACC GTTCGGCACG AACCGCCTGT CGCTGCTGCA CATCCTGAGG AACGGGGTCA GGGACGTCGT GACCGCCGGG AAGGACGCAT TGGCGAAAAT GAAAAGGCAG CACGCGCCGT CCAACGTCCA CGCGATGCAC GCGCGGAGCG AGGGGCCGAA ATCAGCCCAA GCGGTGCTCC GGACTTGACG CGCGAAGCTG TGCCGCAGCG CCAGGAACGC AGCGAGGCAA AAACTCAGGG TGAAAGAGCT GCTGCAAAAA AACATCCCCG GTCGCAGCGT GAAGAAAAGC CGCGGACGGA ACTCAAACCC TCTTCCGAGC TACCCCCTGC CACGGAAGAA GCCGTACAGC CGAGTGAGGA AGGCAGCCGC CGCAGACGGC GTGGTGGCAG GCAACGCGAC CGGAGCGAGC GCCTGGATCG TGCAGCGCGT GAAGCTAGGC AGGCAATTGC AAAGGATTCT CCTCTCCAGC AATCTGCCGA GCAGGTAGCG CACGAGGAAA ATCCTGCGGC AGATCTCATT TCGGGAGCCA TAAATGGAAT ACCGCCACTT ATCTTGGCTT CTACCCCTCT GGAGCAAAAA GAGGCATCAA AGGAATCCCC TGCAGGAGCA AAGAATAATA CCCCTTCCGA ACTTTTGCGG ACAGATAGAA CTTTGCCGGT AATTATGCCC GAAGCTGTAT CCGAAGCTTC GCCCGAAGTC GTACCCCAAG TGGCTGCGAT GGAATCTACC TCTGCTCCGG CGGTCACGAT AGCCGAAAAA GTGGCTCTGG CGAATGAACA GCAGATTACT CCTGAGTCAC CTGACAGACT TCCTGAGGAT CGGAGAGAGG CAGCGACCGC AGCAGCAGTT ACCGTTACCG GTGCGCCGAT TTTAATTGCG TCAGAGCCGC TGGTTGAAGT TGAAGCAGCA AGAGTCGTTC CGGAGGACAT CCCCTCCCAG ATTCCCCTGA GCGCCTTGGA AACGGCTATG CCCCATACAA AAATCGAACA GGAAGAAGTT CCTGCAAAAG AAGGACACCA AGCAGTGCCT CCTCAGCAAC CAGGGGCTAC GCCATCTCTC GATTTAGGTG CGGCCGGTCT GATCATGATC GAGACCCTTC CCGAAAAAAT AAGACCTGCT GAAACCGAAG CAGAAGGAGA AGCAATGAAA GCACAGCCTC GACGTAGAAG AACGCCTCCT CCCCCGGTAA TCGAGCAGCA GGAAGCGCTG GTACAGGTGG AGACCCATAA ATAA
|
Protein sequence | MKRMLFNATQ PEELRVAIVD GQKLIDLDIE SAGKEQRKSN IYKAVITRLE PSLEAAFVEY GGERHGFLPF KEISRSYLKE SPDPGRVRVQ DALHEGQELI VQVDKDERGT KGAALTTYIS LAGRYLVLMP NNPRGGGVSR RIEGEDRAEL RDVMSHLNIP QGMSIIARTA GIGRTEEELQ WDLNYLLQLW RAIEDASKGQ SGAFLIYQES SLVIRAIRDY FNQEIGEILI DTESIYEQAC QFMGHVMPGN VARVKLYRDD VPLFSRFQIE HQIETAYSRQ VTLPSGGAIV IDHTEALVSV DVNSARATRG SDIEQTALAT NLEAADEIAR QLRLRDLGGL VVIDFIDMEV SRNQREVENR LHDALRYDRA RVQMGKISRF GLLELSRQRL RPSLGESSYI SCPRCHGTGH IRGTDSSALH ILRIIQEEAM KENTAVLHAQ VPVDVATYLL NEKRAEIHAI EARLKVSVVL IPNIHLETPN YSITRLRHDD VKLGEVQTSY QMVEKPAQDI PLPSSGQEPK PMRQQAAVRG ITPAQPAPVR EQKPQHEPEP LSLLDKIFGW FKQGGVGEKT VRHEPPVAAA HPEERGQGRR DRREGRIGEN EKAARAVQRP RDARAERGAE ISPSGAPDLT REAVPQRQER SEAKTQGERA AAKKHPRSQR EEKPRTELKP SSELPPATEE AVQPSEEGSR RRRRGGRQRD RSERLDRAAR EARQAIAKDS PLQQSAEQVA HEENPAADLI SGAINGIPPL ILASTPLEQK EASKESPAGA KNNTPSELLR TDRTLPVIMP EAVSEASPEV VPQVAAMEST SAPAVTIAEK VALANEQQIT PESPDRLPED RREAATAAAV TVTGAPILIA SEPLVEVEAA RVVPEDIPSQ IPLSALETAM PHTKIEQEEV PAKEGHQAVP PQQPGATPSL DLGAAGLIMI ETLPEKIRPA ETEAEGEAMK AQPRRRRTPP PPVIEQQEAL VQVETHK
|
| |