| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0948 |
|---|
| Symbol | |
|---|
| ID | 3785208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosospira multiformis ATCC 25196 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007614 |
|---|
| Strand | + |
|---|
| Start bp | 1098572 |
|---|
| End bp | 1101079 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637811031 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_411643 |
|---|
| Protein GI | 82702077 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.601183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTC TAAAACTGTC TCTTCGCATG CTTGCGCGCG ACTGGCGCGC GGGCGAGTTG
CGCGTGCTGG TATTTGCGCT GCTCATTGCA GTGGGTGGGA TGACCACTGT CGGTTTTTTT
GCAGATCGCG TGCAGGTGGC GCTTTCGCGC CAGGGAAACC AGTTGCTGGG AGCGGATCTG
ATCATTTTTT CGGATCATCC TTTGGCTCCG CATTACGCCG AGGAGGCAAA ACGCCGGAAT
CTGTCGATTT CCACTGCCAT CAAGTTCCCG AGCATGACTG CGAAAGGGGA GGAAAGCCTG
CTGACGGAAA TCAAGGCCGT GACGGAAGGT TATCCACTGC GTGGCGAATT GCGCATCAGC
GAGGATTTCA GCAACGGGAC CCCGCCTGCC GAGCGTGTGG CCCATATGGC CAACAGGATT
CCGTCCCCGG GCACGGCGTG GGTGGACGAA AAGCTCATGA TCGGCTTTTC TCTCAAACGG
GGAGACAGGA TCGAGGTGGG CTCATCCCGG TTTGCTGTGG ACGCGCTGAT AACGCAGGAA
CCGGATTATT CGATCGGTTT TCTCAACCTG AGGCCGCGCG TGCTGATCAA CGAGGCGGAT
CTGGCGGCGA CCGGGCTGAT CCAGCAGGGC AGCCGTATTG GTTACCGCCT GCTTGTCTCC
GGCGAGTCGG GCGACGTGGA GGAGTTCCGC AAGTGGGCCG AGCAACGCCT GATGCTGGGA
GAGAAAATCG AGGGTATCCG TGACGCGCGG CCCGAAATCA GGTCGGCGCT GGAGCGGGCG
GAAAAATTCC TGAGCCTGAC CGCGCTGGCG AGCGTGGTGC TGGCGGCCGC CGCTGCGGCC
CTGGCGGTGC GCCGCTTCAC TCAGCGCCAC CTGGATGGCT GTGCAGTGAT GCGCTGCCTC
GGCGCAAGCC AGAGCACCAT TCTGCGTCTC TATCTGTATC ATTTTCTCAC CCTGGGTTTC
GTTGCCAGCA GCCTGGGCTG TCTTCTCGGT TTTGTCGCCC AGCAGGTTCT TACCTATTGG
CTTTCGGGAT TGGTTGAAGC CGAACTACCC TGGCCCACCG TATGGCCGGG CGTGCACGGA
GTGCTGACTG GAACAGTATT GTTGCTTGGC TTTGCGCTTC CTCCGCTGCT CGGTCTGCGC
AGCGTTCCGG CGCTGCGCGT CATGCGCCGG GACATCGGAA TGCCGCCGCA GGGACTCGCC
GGCTATGGCC TGGGACTGAG CGTACTGGCG CTGCTGTTCC TGTGGAAAGC GGGCGATATG
CGGCTCGGCG CCTCCGTCAT CGGCGGTTTC ATCGTGGCAA TAGCAGTTTT TGGCGTAATC
GGATTCCTGC TGATGAGAAT GCTGACCCAC ATCCGCAACC AGGCGGGGGG TGCGTGGCGC
TACGGGCTGG CAAGTATCCG CCGCCGTGCC GTCGCGAGTG TGCTGCAGGC TGTGGCCCTC
GGATTGGGAT TGATGGCGCT ATTGGCGCTG ACACTGATCC GGGACGATCT GCTGAGAAAC
TGGCAGACCA GCCTGCCTCC CGATGCTCCC AACCATTTTC TGGTAAATAT CCAGGAGGAC
CAGCTGGAGC CGTTGGCGGC GTTTTTCAAA GAGCACGGGA TGCAACTGCC GAAGGTTTTT
CCCATGGTTC GAGGCCGCCT CACCGAAATC AATGGTAAGG CGATCACTTC CGAGGATTAT
GCCGATATTC GCGCCAAGCG GCTGGTGGAG CGGGAATTCA ACCTGTCATG GGCGAGCGAG
ATGCAAAGCG ACAACCAGAT CGTAAAAGGT CGCTGGTGGA AACCTGAGGA TCGGGGAGAA
GAGGAAATCT CGATCGAAGA GGATATTGCC AAGACCATCG GGATCCATGT GGGCGACACA
CTGACTTATG ACATAGCGGG CAGCGTGTTT TCCGCCAAGG TTACAAGCTT GCGGAAAGTG
AACTGGGATT CATTCCGGGT AAATTTTTTC GTCGTGACGC CGCCCGGCGT GCTGGAGCAA
TATCCGGCAA GCTATGTGAC GAGTTTTTAT CTTCCATCCA CGCATGTGGA ACTGACGAAC
CAGCTGGTCA AGGAGTTTCC CAACCTGCTC GTGCTGGATG TAGCTGCCAT CCTCGCCCAG
GTTCAAAGAA TGATCGAACA GGTGACGAGG GCCGTCGAAT TCGTGTTCCT GTTTACCCTG
CTGGCAGGGG TGGCGGTACT CTATGCTGCC ATCGTCTCCA CTCAGGATGA ACGTATTCAG
GAGGCGGCCA TATTCCGCAC GCTGGGCGCA AGGCGCAGGC AGCTGGCGCG CGCCTGGGCA
GCTGAATTTG CCATATTAGG AGGCTTTGCC GGGTTTTTCG CGGCGGCGGG AGCAAGCGCA
CTCGGTTATG TCGTTGCGGA ATATGCGCTG AATCTCACTT ATACCTTCAA TTCGTGGATT
TGGCTCATCG GTATAGGCGC GGGAGCCGCG GGCGTGACTC TGGCGGGATT GCTCGGTACG
CGCGCCGCGC TCTCAACCCC CCCGCTCATG ACCCTGCGCA GGATCTGA
|
|---|
| Protein sequence | MNILKLSLRM LARDWRAGEL RVLVFALLIA VGGMTTVGFF ADRVQVALSR QGNQLLGADL
IIFSDHPLAP HYAEEAKRRN LSISTAIKFP SMTAKGEESL LTEIKAVTEG YPLRGELRIS
EDFSNGTPPA ERVAHMANRI PSPGTAWVDE KLMIGFSLKR GDRIEVGSSR FAVDALITQE
PDYSIGFLNL RPRVLINEAD LAATGLIQQG SRIGYRLLVS GESGDVEEFR KWAEQRLMLG
EKIEGIRDAR PEIRSALERA EKFLSLTALA SVVLAAAAAA LAVRRFTQRH LDGCAVMRCL
GASQSTILRL YLYHFLTLGF VASSLGCLLG FVAQQVLTYW LSGLVEAELP WPTVWPGVHG
VLTGTVLLLG FALPPLLGLR SVPALRVMRR DIGMPPQGLA GYGLGLSVLA LLFLWKAGDM
RLGASVIGGF IVAIAVFGVI GFLLMRMLTH IRNQAGGAWR YGLASIRRRA VASVLQAVAL
GLGLMALLAL TLIRDDLLRN WQTSLPPDAP NHFLVNIQED QLEPLAAFFK EHGMQLPKVF
PMVRGRLTEI NGKAITSEDY ADIRAKRLVE REFNLSWASE MQSDNQIVKG RWWKPEDRGE
EEISIEEDIA KTIGIHVGDT LTYDIAGSVF SAKVTSLRKV NWDSFRVNFF VVTPPGVLEQ
YPASYVTSFY LPSTHVELTN QLVKEFPNLL VLDVAAILAQ VQRMIEQVTR AVEFVFLFTL
LAGVAVLYAA IVSTQDERIQ EAAIFRTLGA RRRQLARAWA AEFAILGGFA GFFAAAGASA
LGYVVAEYAL NLTYTFNSWI WLIGIGAGAA GVTLAGLLGT RAALSTPPLM TLRRI
|
|---|
| |