| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0923 |
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| Symbol | |
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| ID | 3786468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | - |
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| Start bp | 1050728 |
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| End bp | 1051663 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637811005 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_411618 |
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| Protein GI | 82702052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00699557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTATTA ATGTGAGGCG CTTTTGGGCA CAAGTTACGT TTGCCTGCGT ATCCTCTTGG
GGGGCGGCAT TTGGGTGGGC AGGGGAGTTT GACTGCCTGA TCGAGGCGCG CCAGATAGTA
GAGATCCGAC CGAGCACGAC CGGAATTATC GAAAAAATCT GGGTGGATCG CGGTGACGCC
GTCAATACTG GTCAGATACT TGTAACGCTG GATTCAGGCT TGGAAAAAGC GACTACCGAG
CTTGCCAAAT ACCGTTCAAC TATGGAAGGT GCTATACAGG CCAGCCAGAG TCGATCCGAA
TATGCGACCT TGAAGCATCA TCGCCGTGAA CAATTACTTG CACAGAAGTT TGTATCTACA
CAGGATCGTG ATGAAGCAGA GACAGAGAAA CGACTGGCTG AAGCAGAGCT AAAGGAGGCT
CTGGATAATA AACGCGTGGC TCAGCTCGAG TACCGGCGTG CCAGTGAACA GCTACGTCTA
CGGACCGTAA GAAGTCCATT CAATGGAATT GTCGTCGACC GGATGATGCA CCCTGGAGAG
TTGACAGACG CAAGGAGTGA TAATCGGAAA ATTATTTTGA AAATAGCGGA TATTACAGTT
TTACATGTAG AAACACTTCT CCCGCTCGAG GCTTATGGAA AGGTCAAACC AGGGCAACTA
TTGGAAGTAT TTCCGGAGGC GCCTGTGGGG GGGTCTTATA AAGCCAGAGT GAAAATCGTA
GATAAAGTCA TGGATACAGC GAGCGGTACT TTTGGGGTAC GAATGGAAAT TGCCAATGAT
GATTCCAAAC TACCTGCAGG CATAAAATGC AGGGTGAGCG TGCCGGGTGT GAACACGCGC
GTTATGCATC AAACTGTTCA TCGACGCGCA TCGGGAGAAT CGATCCGCAG CTCAAATTAC
TCGTTAACAT CCAGGAATGA GAAATCGGGA GATTGA
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| Protein sequence | MTINVRRFWA QVTFACVSSW GAAFGWAGEF DCLIEARQIV EIRPSTTGII EKIWVDRGDA
VNTGQILVTL DSGLEKATTE LAKYRSTMEG AIQASQSRSE YATLKHHRRE QLLAQKFVST
QDRDEAETEK RLAEAELKEA LDNKRVAQLE YRRASEQLRL RTVRSPFNGI VVDRMMHPGE
LTDARSDNRK IILKIADITV LHVETLLPLE AYGKVKPGQL LEVFPEAPVG GSYKARVKIV
DKVMDTASGT FGVRMEIAND DSKLPAGIKC RVSVPGVNTR VMHQTVHRRA SGESIRSSNY
SLTSRNEKSG D
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