Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0688 |
Symbol | |
ID | 3784065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 789801 |
End bp | 792974 |
Gene Length | 3174 bp |
Protein Length | 1057 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637810770 |
Product | hydrophobe/amphiphile efflux-1 HAE1 |
Protein accession | YP_411387 |
Protein GI | 82701821 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.67862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCCC GCTTTTTTAT CGATCGTCCA ATTTTCGCAT CCGTCCTGTC CATCATTATT GTGGTGGTGG GACTCGTTGC GCTGAGAAAC CTCCCAATTG CGCAGTTTCC GGAAATCACG CCGCCCATGG TGCAGATCGA TGCCGATTAC CCCGGGGCGA GCGCGGAAGT TGTTGCGGAA TCTGTCGCGC GCCCCATCGA GGTCCAGCTT CCAGGTATCG ATAATCTTCT TTATTACGAA TCCACTAGCT CGAACGACGG GCACATGACC ATGAAGCTCA CGTTCGAGAT CGGAACGGAC GTGGATATCG CGCAGGTCCA GACGCAGAAC AGGCAGCGCC TAGCCGAACC GCAACTTCCG GACGAAGTCG TGCGCCAGGG TATAACCGTG AAAAAAACGT CGCCTGATCT TCTGGCGGTC ATTGCCCTGA GTTCTTCCGA CCCGCGGCAC GATACCATTT ACCTCTCGAA TTATGCCTTG CTGCGGGTTC TCGATAACGT CAAGCGTCTT CCGGGCGTAG GAGATGCCAT TATCTTCGGC AGCCAGAATT ACTCCATGCG GCTGATCCTG GATCCTGTCC GCATGGCGCA ACTGGACCTC ACTCCCACCG ATATCGCGGC GGTGGTCCGC GAGCAGAACC GGGATTTTCC CGCCGGCAGG ATAGGACGGG AGCCTTCGCC GAAAGGAACG GAGCTTACCA TCCCGGTCAT TACCCAGGGC CGCATGAGCG AAGTGAAGGA ATTCGAGGAT ATGATCGTAA GGGCGTATCC CGACGGTTCC ATGGTGCGAT TGCGGGATGT AGCGAGAGTG GAGCTGGGTG CGCAATCGTA TGATCTGGAA GGGAGATGGA ACGGAAAGCC CAACACCTTT CTTCTGACCT TTCTGGCCCC CGGCGCCAAC GCGCTCGATA CGGTTCACCG GGTACGCCAG GAAATGGACA AGCTCGCGCG CAGTTTCCCC GCCGGCGTCT CCTACGACAT ACCCTATGAC ACTACCATAT TCATCGAAGT TTCCATCAAG GAAGTCCTGA AGACGCTGGT CGAAGCAACG CTTCTTGTCA TACTGGTCGT TTTTGTTTTT CTGCAAAGCT GGAGGGCAAC GATCATTCCA GCGGTCGCGG TTCCTATTTC ACTGATCGGA ACCCTGGCCG GAATGGCAGC GCTTGGATTT TCAATCAATA CCCTTACCCT GTTCGGCATG GTGCTTGCCA TCGGGATCGT GGTGGATGAT GCGATCGTGG TGGTGGAAAA TGTCGAGCGG CATATGCGGG AGGGGTTGCC GCCCAGGGAG GCGGCCAGGG TGGCCATGGA TGAAGTGGCG GGCCCCGTCA TTGCCATCGT CCTGGTGCTG GGCGCGGTGT TTGTTCCAGT CGCTTTTCTG GGCGGAATCA CCGGTGAATT GTACAAACAG TTTGCGATTA CCATTGCCCT GTCCGTCGCG ATATCGGGTT TTGTGGCGCT TACCCTGAGC CCCGCGCTCT GTGCGCTTAT TCTCAAGCCG GGGCATGGGG AGCCCGCAAA GTACTGGAAG CTGTTCAACC GCTCGTTTGA CTGGATGCAG ACACGCTATA CAAATGGCGT CGGAATGGTA TTGAAACGAT CCATGATCGC TCTCTGTATT TTTGCCGTGA TGATATTCGT CCTCCTTGGC TTGTTCAGAA CGATCCCGGG CAGCTTTCTC CCGGAAGAAG ACCAGGGCTA TTTCATTACC GTTGTCCAGT TGCCGGACGG AGCCTCCAAG GAACGCACGA TTGATGTATT GAGCAAAGTA GAGCAATACT TCCTGTCGAT TCCCGCGGTA CACTCAACGG ATGCGCTGGC CGGCCAGAAC TTCGTGTTCG GCACGCGGGG AGCGAATCAG GCGACGATGT TCGTTCCGCT GCAGTCTTGG GACACGCGCA AGAGTGCCGG GGAGCATGTC ACCGGCCTTA TCGCATCCGC CTTCCAGGAG TTTGCAAAGA TACCGGAAGC ACTGATTCTT GCCTTCAATG CCCCATCCAT CAGAGGCCTG GGTTCCACCG GGGGTTTTTC CCTGCAGGTA CAGGATCCGA GCGGGGGCGA TTTCAAAGAG TTTGCCGAGA TTACGCAGAA ATTCGTCGCC AAGGCTGTGG AACATCCTGC TATCGCTGCT GCCAGCACCA ATTTTCGCGT CAGTGCCCCC CGGCTTTATG CCCGCGTTGA CCGGGAACGC GCCAAAGCGC TGGGCGTGCC GATTTCCGAA GTCTTCGACA GCATGCAGGC TTATTTCGGC AACCTGTATA TCAACGACTT CGTGAAATAT GGTCGTATCT ATCGCGTCCA GACGGAAGCG CAGCCTCAGT ACCGATCAAG GCCGGAGGAT ATCGAGAAAA TTTACGTGCG TGCGCGGAAC GACAAGGGCC ACGTCATGAT TCCACTGAAT TCGGTGATCA CCACCGAATT CACCAGCGGA CCTGATCCCG TCACCCACTT CAACGGATTC AATTCCGCAC TCGTGCTGGG CGGCGCCGCT TCCGGCTACA GCTCGGGGCA GGCCCTCGAT GCGCTGGAAC AGATCGCAGA TGAGATATTG GCGCCAAAAG GTTATACGAT CGACTGGAGT GGAATATCCT TTCAGGAGCG CCAGGCAGGA GGGAAATCGG TTCTGGTATT CGCCTTCGCC CTGCTCATGG TCTTTCTGGT GCTGGCCGCC CTTTACGAAA GCTGGTCAGT TCCGCTCGCG GTGATTCTTG CAATTCCGTT CGGAATTTTA GGCGCATTAC TGGCTATCTG GGTTCGCGAA TTGACCAACG ACATCTATTT CCAGATCGGG CTGGTGACAT TGATCGGATT ATCCGCGAAG AACGCCATCC TGATCGTGGA ATTCGCCAAT CAGCGTTATG CGAACGGGGA GCCTTTGCTC GACGCGGCGA TGGAGGCCGC CCGGCTACGT TTCCGTCCCA TTATCATGAC CTCCATGGCT TTTATCCTGG GGGTGTTTCC GCTGGTGATC GCTTCCGGCG CAGGGGCCGC CAGCCGGAAT TCCATCGGGA CGGGTGTTTT CGGGGGGATG CTGGCTGCGA CCTTTCTTGC CATCTTTTTC GTACCTCTCT TTTTCGTAGT AATAAGAAAA ATGACGCATC GGCGCGGACA GCCAGAGGTT CGAGCATCCC ATGCGGCGCC GGATAATTCT CCTTCCACCG TCGAAGACGA ATAA
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Protein sequence | MSSRFFIDRP IFASVLSIII VVVGLVALRN LPIAQFPEIT PPMVQIDADY PGASAEVVAE SVARPIEVQL PGIDNLLYYE STSSNDGHMT MKLTFEIGTD VDIAQVQTQN RQRLAEPQLP DEVVRQGITV KKTSPDLLAV IALSSSDPRH DTIYLSNYAL LRVLDNVKRL PGVGDAIIFG SQNYSMRLIL DPVRMAQLDL TPTDIAAVVR EQNRDFPAGR IGREPSPKGT ELTIPVITQG RMSEVKEFED MIVRAYPDGS MVRLRDVARV ELGAQSYDLE GRWNGKPNTF LLTFLAPGAN ALDTVHRVRQ EMDKLARSFP AGVSYDIPYD TTIFIEVSIK EVLKTLVEAT LLVILVVFVF LQSWRATIIP AVAVPISLIG TLAGMAALGF SINTLTLFGM VLAIGIVVDD AIVVVENVER HMREGLPPRE AARVAMDEVA GPVIAIVLVL GAVFVPVAFL GGITGELYKQ FAITIALSVA ISGFVALTLS PALCALILKP GHGEPAKYWK LFNRSFDWMQ TRYTNGVGMV LKRSMIALCI FAVMIFVLLG LFRTIPGSFL PEEDQGYFIT VVQLPDGASK ERTIDVLSKV EQYFLSIPAV HSTDALAGQN FVFGTRGANQ ATMFVPLQSW DTRKSAGEHV TGLIASAFQE FAKIPEALIL AFNAPSIRGL GSTGGFSLQV QDPSGGDFKE FAEITQKFVA KAVEHPAIAA ASTNFRVSAP RLYARVDRER AKALGVPISE VFDSMQAYFG NLYINDFVKY GRIYRVQTEA QPQYRSRPED IEKIYVRARN DKGHVMIPLN SVITTEFTSG PDPVTHFNGF NSALVLGGAA SGYSSGQALD ALEQIADEIL APKGYTIDWS GISFQERQAG GKSVLVFAFA LLMVFLVLAA LYESWSVPLA VILAIPFGIL GALLAIWVRE LTNDIYFQIG LVTLIGLSAK NAILIVEFAN QRYANGEPLL DAAMEAARLR FRPIIMTSMA FILGVFPLVI ASGAGAASRN SIGTGVFGGM LAATFLAIFF VPLFFVVIRK MTHRRGQPEV RASHAAPDNS PSTVEDE
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