Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0647 |
Symbol | |
ID | 3785420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | + |
Start bp | 745040 |
End bp | 747163 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637810729 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_411346 |
Protein GI | 82701780 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.407599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGAAC GCCTGAGCGA GATATCGCGC CACATGCGGG AATTGCGCGA TGCAATCGAG CTGCATAATA TCCGTTATTA CGAGCTGGAC ACTCCGACGA TTCCCGATGC GGACTTCGAC AAGCTGTTCC GCGAACTGGA GGAGCTCGAG CAACGTCATC CGGAGCTCAT AACGCCAGAT TCCCCTACCC AGCGCGTTGG TATTCCTCCC CTCAAAGCGT TTCCCCAGGT CGTTCACCGT ACGCCGATGC TTTCCCTCAG CAATGCATTC ACCGAGGGCG AGGTAGAGGC ATTCGACCGG CGTGTGCGCC AGTCCCTAGG CATCGCGCAG GTCGAGTATG CGGTAGAGCC GAAATTCGAT GGTCTGGCCA TAAGCCTCTG CTATGAGAAC GGCATGCTTG TCTCGGGAGC CACTCGCGGA GATGGCTACA TCGGAGAGGA TGTAACCTTG AACCTGAAAA CCATTCGCAG CATTCCTCTC GGCCTGAGGG CAGGAGATGG GAGCGCCGAA GTTCCTGCAT TTCTGGAGGT CCGGGGTGAG GTATTAATGT TGAAAGCGGA TTTCGAGCGA TTGAATCGGC AGCAGCGTGA AAAGAACGAA AAGACCTTTA TAAATCCGCG CAATGCTGCC GCAGGTTCCT TGCGGCAACT CGATCCCTGC ATAACTGCCA ATCGCAACCT GAGGTTCTTC GCATATGGTA TCGGTGTCTG CGAAGGGGGA AATGTTCCTC ATGACACACA CAGCCACTTG CTCGACTATC TCTCGTCACT GCGTTTTCCG GTAATGCGTG AACGCAGGAC GGTGACGGGC GTTGCCGGTT TGTTGGAGTA TCATCATGAA ATAAATGGAT TGCGCGAACA ATTGTCTTAT GACATCGATG GTACGGTGTA CAAGGTCAAC GAATTGGAAT ATCAGGAAAA ACTCGGTTTC GTATCCCGTG CCCCGCGATT TGCGCTCGCC CATAAGTTTC CAGCGCAGGA AGCAACGACC GAGTTGCTTG GAATCGATGT GCAGGTGGGC AGAACGGGGG CGCTGACTCC GGTGGCGCGC CTCAAGCCTG TATTCGTGGG AGGCGCGACT GTCACCAATG CGACCCTGCA TAACGAAGAT GAGATCCGGC GCAAGGACGT CATGATCGGT GACCGGGTAA CGGTAAGGCG AGCAGGAGAT GTCATTCCGG AAGTGGTCGC AGTTCAGAAG GAAAGCCGGC CGTCGAACGC GAAACCTTTC GTGATGCCTG AGCACTGCCC TGTTTGCGGG TCCAGGACGA TTCGCTTGCC TGGAGAAACT CTGACCCGCT GCACGGGCGG ATTGTTTTGT CCCGCTCAAC GGAAACAGGC CATTCTGCAT TTTGCCTCGC GTCGCGCCAT GAATATCCAC GGACTGGGCG ACAAGCTGGT GGATCACCTG GTGGACAATG CCATCATTCG GACTCCCGCA GACTTGTATA AACTGGGATT GGCAGCGCTC GCCGCGCTGG ATCGGATGGG GGAGAAATCG GCGGGAAATA TTATCAATGA AATTGAAAAA AGCAAAGACA CGACCCTGGC TCGATTCATC TATTCCCTGG GTATTCGCAA CGTGGGCGAG GCTACTGCGC GAGACTTGGC CCGCTATTTC GGAGGACTCG ATCGCCTGAT GGATGCAGAT GTGGAAACTT TGCAACAGGT ATCGGATGTA GGCCCTGTCG TCGCCCAGAG CATTGCCGAT TTTTTTGGTG AAAGGCACAA TCGTGAGGTT GTAGAGCAAT TGCGCGCGGC GGGAATCCGC TGGAAAGAAG GTGCGGGAAC ACAGACAACA GACCATGCAG CAGGTTCTGC ACATCCGGGA GCAGCCGCCG CAAGCAGTAA AATTGCCGGC AGGAGCTTTG TGCTGACTGG AACACTGCCG ACCATGAGCC GGGAGGAGGC CAGGGAGAAA ATTGAAGCGA TGGGAGGGAA GGTTGCGGGC AGCGTGTCCA AGAAAACCGA TTATGTCGTC GCCGGCGCGG ATGCGGGCAG CAAGTATGAC AAAGCGCTTG AATTGGGAGT GGCGCTTCTC GATGAGGCCG AGTTGATAAG ATTATTGCAG GCTTCCCAAG CAGATAACAG TTCGACGCAC GTGGATCCTG AACGGATGGT TTAA
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Protein sequence | MSERLSEISR HMRELRDAIE LHNIRYYELD TPTIPDADFD KLFRELEELE QRHPELITPD SPTQRVGIPP LKAFPQVVHR TPMLSLSNAF TEGEVEAFDR RVRQSLGIAQ VEYAVEPKFD GLAISLCYEN GMLVSGATRG DGYIGEDVTL NLKTIRSIPL GLRAGDGSAE VPAFLEVRGE VLMLKADFER LNRQQREKNE KTFINPRNAA AGSLRQLDPC ITANRNLRFF AYGIGVCEGG NVPHDTHSHL LDYLSSLRFP VMRERRTVTG VAGLLEYHHE INGLREQLSY DIDGTVYKVN ELEYQEKLGF VSRAPRFALA HKFPAQEATT ELLGIDVQVG RTGALTPVAR LKPVFVGGAT VTNATLHNED EIRRKDVMIG DRVTVRRAGD VIPEVVAVQK ESRPSNAKPF VMPEHCPVCG SRTIRLPGET LTRCTGGLFC PAQRKQAILH FASRRAMNIH GLGDKLVDHL VDNAIIRTPA DLYKLGLAAL AALDRMGEKS AGNIINEIEK SKDTTLARFI YSLGIRNVGE ATARDLARYF GGLDRLMDAD VETLQQVSDV GPVVAQSIAD FFGERHNREV VEQLRAAGIR WKEGAGTQTT DHAAGSAHPG AAAASSKIAG RSFVLTGTLP TMSREEAREK IEAMGGKVAG SVSKKTDYVV AGADAGSKYD KALELGVALL DEAELIRLLQ ASQADNSSTH VDPERMV
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