| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0639 |
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| Symbol | |
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| ID | 3785412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | - |
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| Start bp | 730434 |
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| End bp | 733904 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637810721 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_411338 |
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| Protein GI | 82701772 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCA AGCTGACCAT TCCCTCATCC GGATCGACTA TTCGCTACGG TCACTTTGAC
GGATCCTCCG ACTCGCTTGC CCTCGCCCAA CTGGCGCTGG AGGCGAAAAA AGCAAAGCCC
GTTACCATTA TTACGGCAAG CGCTTTGGCC GCTCAAAGAC TGCTGGAGGA AATACCTTTT
TTTGCACCCG AACTGAGAAC CCGGCTGCTG CCGGATTGGG AAACGTTGCC CTACGATACT
TTTTCGCCGC ATCAGGACCT CGTTTCCGAA AGACTGGCAA CGCTCTACCA ACTCATGAAT
GGCGCTTGCG ACATATTGAT TGTTCCTGTC ACCACGGCCC TGTACCGCAT GCCACCGCCC
GAGTACCTGG CGGCACACAC TTTCTTTCTC GCTCGCGGCG AAACCCTTGA CCTGAACGCC
TTGCGCAGCC AGATGACCCT GGCTGGCTAC AGCCATGTGA CCCAGGTACT TTCACCGGGG
GAATACAGCG TACGTGGGGG ACTGATCGAC CTGTTTCCGA TGGGAAGCCC GTTGCCCTAC
AGGATCGACC TGCTCGATAA TGAAATCGAA ACCATCCGGA CCTTTGACGT CGATACCCAG
AGAAGCGTTT ATCCGGTCAC CGAGATACGA TTACTGCCGG CGCGCGAGTT TCCTCTCGAT
GAGGAAGGCC GTACACGCTT TCGAGGCAGA TTCCGTGAAA AATTCGAGGG AGATCCTTCC
AGGAGTCTCA TTTACAAGGA TATCAGCAAG GGTGGCAGTC CCGCAGGTAT CGAATACTAT
CTGCCTCTTT TTTTTGAGCA TACGGCGACA CTGTTCGATT ATTTGCCGCA AACAGCGCTG
TTGTGCCTGC ATCATGAACT TTACCAAACG GTAGAGAGTT TCTGGCATGA CACGCAGGCG
CGCTATCAGC TTCTGCGGGG CGATAGCGAC CGGCCGCTGC TGAAACCCGC AGACTTGTTC
CTTACCACGG AAGCATTCTT CGGGGCGTTG AAACCCTACC CGCGCATCGA GATTCCACCG
GAAGAACGGG CGACGAAAAC CGGCGGAGCC GAGGTGCAAG GTTTGAGCAT TCCTTTGCCT
CCGCTTCAGA TCGATCGTCG CGCCGTGAAT CCGGCGGAAA AACTTTCTGC CTTTATTGCT
GAATTCGAAT CCTCCGGAGG GGGAAGAACG TTGCTCCTTG CCGAAAGTCT GGGCAGGCGT
GAGTTGATTG CCGATCATTT GAAGCAGTAT AGGCTCAATC CCGACATATG CGACAACTAT
GCGCAATTTC GCGCAAGCAC TAGCCCCTTC GTGCTCGGTG TGGGGCCGCT GCACAACGGC
TTCATATACC CGGAAAAGGG AATAGCCTTT GTAACCGAAA GCGAGCTCTA TGCCAGACAC
CTGCACGGCC GGGGTGAACG GGATTCGCGC AAAACCAGCG CGGTCGCCGA TGCCGTTCTG
CGCGATCTGT CCGAGATCAA GGCGGGCGAT CCCGTCGTCC ATGAACAACA CGGCATAGGC
CGTTATCTCG GGCTCGTCAG CATGGATCTG GGAGAAGGCG AAACGGAGTT TCTGTCGCTG
GAATACGCCA GTGGTGACAA ATTGTATGTA CCTGTCTCGC AACTGCATCT TATCGGACGA
TACAGCGGCG CTTCACCGGA ATCCGCGCCC CTGCATAAAC TGGGTAGCGG CCAGTGGGAT
AAGGCCAAGC GCAAGGCGAT GCAGCAGGTA CGCGATACCG CGGCCGAACT GCTCAACATC
TATGCCCAGC GCGCCGCCCG TGTTGGCCAC GCATTTCGCC TGAAAGAGCA GGATTACGAG
GCGTTCGTCG AAGGTTTCGG ATTCGAGGAG ACGCCGGATC AGGCGACTGC CATCGCTGCG
GTAATCGATG ACCTGACTTC TGCCCGCCCC ATGGACAGGC TCATCTGCGG AGATGTGGGT
TTTGGCAAAA CGGAGGTGGC GCTAAGGGCG GCTTTTGTCG CTGTCGCGGA TGGCAGACAG
GTCGCGGTAC TGGTTCCTAC CACGCTGCTG GCGGAACAGC ATTTCCAGAA TTTTTCGGAC
CGTTTCGGCC TGATTGCGGA AGAATGGCCG GTTAAAATTG CCGAGCTGTC GCGTTTCCGT
TCAGGCAAGG AGCAGGCCCA GGCGCTGGCG GGCCTCGCCG ATGGGCAGAT AGACATCGTG
ATCGGTACGC ATAAACTGAT CCAGAAAGGC GTCAGATTCA AAAACCTGGG ACTGGTCATC
ATCGACGAGG AGCACCGTTT TGGTGTGCGC CATAAGGAAC AGCTGAAAAG CCTCCGCTCC
GAAGTGGATG TCCTAACCCT TACCGCCACG CCTATTCCCC GCACCCTGGC CTTGTCATTG
GAGGGACTGC GCGATTTCTC CGTCATTGCA ACAGCGCCGC AACGGCGGCT GGCCATCAAG
ACCTTTGTAA ACCGTTTTTC CGAGGGAATC ATCCGCGAGG CGTGCCTGCG GGAATTGAAG
CGGGGTGGGC AGATATATTT TTTACATAAC GAGGTGAGTA CCATCCAGAC GATGCATGAC
AAGCTCGCCC GCCTGCTGCC CGAAGCGCGA ATAGGCATCG CCCACGGACA AATGCGGGAA
CGCGAGCTGG AACATGTGAT GAAAGATTTT TACCAGCAAC GGTTTAATCT GCTGCTCTGC
ACAACCATCA TCGAAACCGG CATCGATGTG CCCACTGCCA ATACCATTAT CATTCATCGC
GCGGATAAGT TCGGATTGGC GCAACTGCAT CAGCTGCGCG GGCGGGTAGG ACGGTCCCAT
CATCAGGCGT ACGCCTACCT GCTGGTACCG GAGGAGGAGG CATTGGGGAC TCAGGCCAGG
AAGCGCCTGG AGGCTGTTCA GTCCATGGAA GAGCTGGGGG CCGGCTTCTA CCTCGCCATG
CACGATCTCG AGATTCGGGG CGCTGGCGAA GTTCTTGGGG AATCCCAAAG CGGCGAGATG
CAGGAAATCG GCTTCACCCT CTACGCCAAT ATGCTGGAAG CAGCCGTGCG ATCACTGAAG
GAAGGCAAGG AGCCCGACAT GCAACACCCC CTCGGGGTTG CCACCGAAAT CAACTTGCAT
GTTCCCGCGT TGCTGCCTGA GGATTACTGC AGTGATATAC ATGAACGGCT GATCCTGTAC
AAACGCATGG CCAATTGCAC CAGCGATGAG CAACTGGATG AAATGCAGAT TGAATTGACG
GACCGCTTCG GCCTATTACC GGATCCGGTC AAGGCATTGC TCGATTGCCA CCGTTTACGT
ATCGCTGCAG CGCCGCTGGG AATCATTCGT GTTGAGGCAA GCAGCGAATC CATTCAGGTT
CAATTTACGC CCAATCCTCC CGTGGATGCG GCAAGGATTG TCGCCCTTCT TCAGCGTAGC
CGCGACTATC AGCTTTCCGG ACCTGATCGA TTGAAAATAA AAACGTGCAT CCCGGAGGCG
GGAGAACGAG TCAGGCGGAT AATGGACTTG TTTACCGAAT TGGGCACATA A
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| Protein sequence | MAFKLTIPSS GSTIRYGHFD GSSDSLALAQ LALEAKKAKP VTIITASALA AQRLLEEIPF
FAPELRTRLL PDWETLPYDT FSPHQDLVSE RLATLYQLMN GACDILIVPV TTALYRMPPP
EYLAAHTFFL ARGETLDLNA LRSQMTLAGY SHVTQVLSPG EYSVRGGLID LFPMGSPLPY
RIDLLDNEIE TIRTFDVDTQ RSVYPVTEIR LLPAREFPLD EEGRTRFRGR FREKFEGDPS
RSLIYKDISK GGSPAGIEYY LPLFFEHTAT LFDYLPQTAL LCLHHELYQT VESFWHDTQA
RYQLLRGDSD RPLLKPADLF LTTEAFFGAL KPYPRIEIPP EERATKTGGA EVQGLSIPLP
PLQIDRRAVN PAEKLSAFIA EFESSGGGRT LLLAESLGRR ELIADHLKQY RLNPDICDNY
AQFRASTSPF VLGVGPLHNG FIYPEKGIAF VTESELYARH LHGRGERDSR KTSAVADAVL
RDLSEIKAGD PVVHEQHGIG RYLGLVSMDL GEGETEFLSL EYASGDKLYV PVSQLHLIGR
YSGASPESAP LHKLGSGQWD KAKRKAMQQV RDTAAELLNI YAQRAARVGH AFRLKEQDYE
AFVEGFGFEE TPDQATAIAA VIDDLTSARP MDRLICGDVG FGKTEVALRA AFVAVADGRQ
VAVLVPTTLL AEQHFQNFSD RFGLIAEEWP VKIAELSRFR SGKEQAQALA GLADGQIDIV
IGTHKLIQKG VRFKNLGLVI IDEEHRFGVR HKEQLKSLRS EVDVLTLTAT PIPRTLALSL
EGLRDFSVIA TAPQRRLAIK TFVNRFSEGI IREACLRELK RGGQIYFLHN EVSTIQTMHD
KLARLLPEAR IGIAHGQMRE RELEHVMKDF YQQRFNLLLC TTIIETGIDV PTANTIIIHR
ADKFGLAQLH QLRGRVGRSH HQAYAYLLVP EEEALGTQAR KRLEAVQSME ELGAGFYLAM
HDLEIRGAGE VLGESQSGEM QEIGFTLYAN MLEAAVRSLK EGKEPDMQHP LGVATEINLH
VPALLPEDYC SDIHERLILY KRMANCTSDE QLDEMQIELT DRFGLLPDPV KALLDCHRLR
IAAAPLGIIR VEASSESIQV QFTPNPPVDA ARIVALLQRS RDYQLSGPDR LKIKTCIPEA
GERVRRIMDL FTELGT
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