Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A0372 |
Symbol | |
ID | 3784564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | + |
Start bp | 404913 |
End bp | 405725 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637810448 |
Product | dehydrogenase catalytic domain-containing protein |
Protein accession | YP_411072 |
Protein GI | 82701506 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00297203 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCATC AATACACAAC ACTTGAGAGA AATCGATATT TCGAGGTGCT TGGCGGTTTG AACGTGGAAA ATCGCGGCGA CAATAAAGTT GCGATGCTCT CGGAACTTGA TATGACATCG GCGCAGGCAT TGCGGACTTC CGTCGACCGG CAGACCGGCA TCAAACCCTC GTACACTGCG ATTGTAGCCA AGGCAGTTTC AATAGCCTTG CGAGAGCATC CATATGCTAA CCGAATGGCA GTGGAACGTT TGTTCTGGAA GCGCATCCTG CAATTGCATG ACGTGCATAT GACAATTGCG GTAGAACGTG ACCGGCCGGG TATCGAACAG GCCGTGTTCG CAGGTACGAT CAGGGATACT GACAAGCTGG ATGTAGCTGC CATCACCAAA GAGTTGCAAA GCTTGGCGCA GTCAACAGAA GAAACCAACG AACGCTGGCG ACTGCTCAAG CGTATGGTTG AGACCCTTCC GCCCGCTTTG GCTCGCCGGT TAATATCGAT TCCGCGTTGG CTTCCAGATC AGTGGATCAA GCATCGAGGC GGCTCAGTCA TGATTTCATC GCCCGCCAAA TATGGGGTGG ATATGATGGT TGCGAACTGG CCATGGCCGA TCGGCTATTC TTTCGGCTTG GTGAAAGACC GGGTGATCGC GGTGGAGGGT GCGGCGCAGG TAAGACCCAC CATGGTTCTC ACCATGAGTT TCGATCGTCG GCTAATGGGG GGAGCACCGG CTGCCCGGTT TTTTCGCACA GTATGCGAAC ATATAGAGCA TGCGGAACGG GATATGGCTT TACCTGTGAA CATCCCTTCA TAG
|
Protein sequence | MDHQYTTLER NRYFEVLGGL NVENRGDNKV AMLSELDMTS AQALRTSVDR QTGIKPSYTA IVAKAVSIAL REHPYANRMA VERLFWKRIL QLHDVHMTIA VERDRPGIEQ AVFAGTIRDT DKLDVAAITK ELQSLAQSTE ETNERWRLLK RMVETLPPAL ARRLISIPRW LPDQWIKHRG GSVMISSPAK YGVDMMVANW PWPIGYSFGL VKDRVIAVEG AAQVRPTMVL TMSFDRRLMG GAPAARFFRT VCEHIEHAER DMALPVNIPS
|
| |