| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0335 |
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| Symbol | |
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| ID | 3785960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | + |
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| Start bp | 364668 |
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| End bp | 367610 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637810411 |
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| Product | response regulator receiver/GGDEF/EAL domain-containing protein |
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| Protein accession | YP_411035 |
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| Protein GI | 82701469 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.376364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGCATG ATATTTCAAT CCACGATGCC CGGAAAGTCG AGATTCTCAT CGCAGAGGAC
AGTCCCACAC AAGCGGAAAA ACTGAAGTAT CTGCTGGAGG AAAACGGCTA CCAAGTTACC
ACCGCAGGCG ATGGCAAGCA GGCCCTCTCG AGGGCGCGGC AGCGCAACCC GACATTGATT
ATCAGTGATG TGATGATGCC GGAGATGAAT GGGTTTGCGT TATGCAGTGA AATCAAGCGG
GACGCACAAC TCAAGAAGAT TCCAGTGATC CTGCTTACCT CGCTGGCGGA TGTCAAGGAT
ATCATCCAGG GATTGGAATC GGGGGCCGAT AATTTTATCC GCAAGCCATA CGACGACAAA
TATCTTCTTG ATCGTATCGA GTATCTACTG ATGAGCCATG AGCTGCGCAA GAGTCAGAAG
ATGCAAATGG GAATGCAGAT TTATCTGGGC GGGCAAAAAC ATTTCATCAC CAGCGAGCGG
CAGCAGATCG TGGATCTATT GATTTCAGTT TATGAGGATG CGGTCCATCT CAACGCTGAA
CTGAATAGGC GACAACGTGA GCTGACGCAC TCGAATCGCT TGCTCAATGG GCTGTATCGA
ATGGCGGAAG GCTTGAACCA GGCAGCAACC GAGCGCGAGG TCAGCGAAAA AGCGCTGGAG
TACGCCATGA TGTTCCCGGG AGTCCAGGCG GGGTGGCTTT ATTTATGGAA TACCGACGGC
CTGAGTTTGG CAGGCTCACG AAATGTACCT GCATCAGTAA GTGCGGATGG CTGGGACACA
TCATGCAATT GCCTGCGCCT TTTGCTCGCC GGGGAGCTCG GCAATACTCC TAAAATTTTA
AACTGCGAGC GCCTCTTCTC AAGCGGAGGC AATGGTTCTT GCCACCATGT CACCATTCCG
ATGTGGAGTG GCAGCAAGAA CCAGGGCGTG ATGAATCTCC TGGGCTTGGA ACAGGATCAG
TTCAGGGAGA ATGAGTTGGA TACATTCTAT GGGATTGGGC AGCAGGTAAG CGTAGCGCTG
GAGCGTGCCC GATTGCATGA ACATATGGAA AAATTGGTGG GGGAGCGTAC TGCGGCGTTA
ACAGCGGAGA TTGCTCAGCG CAAGGAATAT GAAGCGAGAG TAGTGCGGCT CAATCGTTTG
TATAGCGTGT TAAGTGGTAT CAATACAGCC ATTGTGCGTG TCCGTGAAAT ACAGGAGCTT
TTCAATGAGG CATGCCGTAT TGCAGTCGTT CACGGCGGAT TCGCTTTCGC TTGGATCGGA
ATGCTGCGGG GAAGTACAAG AGTAACTACA CCAGTGGCCA AGATGGGGCA AGGAAATGAT
GAGCTGCTCC AACTCAACCT ATCGCTGATG AGTGCGCCGA AAGGCGCTCC GCTGATAGAG
GATTTAATCA CGCATCTCAA GCCGTTCATT TGCAATGATC TCGTTGCCGA TAAGCGCATG
GAGGGTTTGC ATGATGCACC GCTGGCTCAC GATTATCTTT CCATGGCGAT CTTGCCCCTG
GTTCTCGATG GGCAACTCGT CGGCACTCTG ACTCTCTATA CTCCCGAGAC AGGGTTTTTC
GACGAGGAGG AAATTGCTTT GCTGGTAGAA ATGGCGGGCG ATATTTCGTT TGCAATGGAT
CACCTGAAAA AAGAGGAGCG CATCAATTAT CTGGCTTTCT TCGACGCTGT AACCGAGCTC
CCGAACCGGG CGTTATTTCT AGACCGGGTT AATCAGCGGA TCAAGATGGT TTCTTCCGGT
CACGAGATGC TTTCCGTAAT TGTTCTGGAC ATCGAACGGT TCAGCAGCAT TAATGAATCG
TTCGGTCATG GAGCGGGGGA CAGTCTACTC CGCCAACTTG CAAAGCGGCT GAAGCAGCTG
CTTTCAGAAG CAGACATTCT GGCTCATCTT TCCGCCGATT ATTTTGCTAT CGCCAGAAAA
CATGAAGAGG AAAGCATCGA CATCGTCCAT ATGCTGGAGA AGCTTCTGTT CGAGGTTCAG
AACGAGCCCT TTTTAATTAA TGGACAGGAA CTGTGGGTTT CCGCCAGGGC GGGCGCTTCG
TTCTTCCCTA GCGATGGCCT GGATACTGAT ACGCTCTTGA GAAATGCCGG GACAGCGCTA
AAGAAGGCCA AGCATTCTTC CGACAAGCAT CTGTTTTATG CTCCCGAATT TCATGCACGG
GTTAAAGAAA AACTGAGACT CGAGATCAAG CTGCGTCAGG CGTTGGAGCA GGAACAATTG
ATGCTGTACT ACCAACCCAA AGTTGATTTG AAGAGTGGAC AAATAAGCGG ACTCGAGGCG
TTGATGCGCT GGCACGATCC GGAAAGCGCT ACGGTACTTT CACCGCTTCA CTTCATTCCC
TTGCTGGAAG AGACGGGAAT GATTCTTGAT GCAGGCCGGT GGGCGCTGAG CAAAGCGATA
TCGGATGCAA ATAAATGGAA AGCCATGAGT TTGAATCCAC CGAGAATTGC CATCAATGTT
TCTCCCGTTC AGTTACGGCA GAAGGATTTT GTCGATATGG TGGCGAATGT GGTCAGCGAC
GCGGGAGATC TGGCCGCATT CCAGTTCGAG ATTACGGAAA GTGTAATCAT GCACGATATC
AAAGCCAATA TCGAGAAGCT CAATCTCATC CAGGAAATGG GTATAGAGCT TGCGATAGAT
GATTTCGGTA CTGGTTATTC TTCGCTCAGT TATATCGCCA AACTGCCCGT CAATGTCCTG
AAAATTGATC GCGCTTTCAT CAGTGATATG AATATCAATC CAGACAATCT CAGCATTGTT
TCCGGAATCA TATCCCTGGC ACATTCGCTG CATTTGCGTG TTGTTGCCGA GGGAGTGGAA
ACGGCTGAGC AAGCGGAGCT TTTGCGAAGC CTCGAATGTG AGGAGATGCA GGGCTATCTC
TTTAGTCCCG CCGTCACAGC GACCAAGATA ATAGAGTTTC TACACCAGAA GAAATCTCTT
TAA
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| Protein sequence | MAHDISIHDA RKVEILIAED SPTQAEKLKY LLEENGYQVT TAGDGKQALS RARQRNPTLI
ISDVMMPEMN GFALCSEIKR DAQLKKIPVI LLTSLADVKD IIQGLESGAD NFIRKPYDDK
YLLDRIEYLL MSHELRKSQK MQMGMQIYLG GQKHFITSER QQIVDLLISV YEDAVHLNAE
LNRRQRELTH SNRLLNGLYR MAEGLNQAAT EREVSEKALE YAMMFPGVQA GWLYLWNTDG
LSLAGSRNVP ASVSADGWDT SCNCLRLLLA GELGNTPKIL NCERLFSSGG NGSCHHVTIP
MWSGSKNQGV MNLLGLEQDQ FRENELDTFY GIGQQVSVAL ERARLHEHME KLVGERTAAL
TAEIAQRKEY EARVVRLNRL YSVLSGINTA IVRVREIQEL FNEACRIAVV HGGFAFAWIG
MLRGSTRVTT PVAKMGQGND ELLQLNLSLM SAPKGAPLIE DLITHLKPFI CNDLVADKRM
EGLHDAPLAH DYLSMAILPL VLDGQLVGTL TLYTPETGFF DEEEIALLVE MAGDISFAMD
HLKKEERINY LAFFDAVTEL PNRALFLDRV NQRIKMVSSG HEMLSVIVLD IERFSSINES
FGHGAGDSLL RQLAKRLKQL LSEADILAHL SADYFAIARK HEEESIDIVH MLEKLLFEVQ
NEPFLINGQE LWVSARAGAS FFPSDGLDTD TLLRNAGTAL KKAKHSSDKH LFYAPEFHAR
VKEKLRLEIK LRQALEQEQL MLYYQPKVDL KSGQISGLEA LMRWHDPESA TVLSPLHFIP
LLEETGMILD AGRWALSKAI SDANKWKAMS LNPPRIAINV SPVQLRQKDF VDMVANVVSD
AGDLAAFQFE ITESVIMHDI KANIEKLNLI QEMGIELAID DFGTGYSSLS YIAKLPVNVL
KIDRAFISDM NINPDNLSIV SGIISLAHSL HLRVVAEGVE TAEQAELLRS LECEEMQGYL
FSPAVTATKI IEFLHQKKSL
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