| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmul_A0084 |
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| Symbol | |
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| ID | 3785809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosospira multiformis ATCC 25196 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007614 |
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| Strand | - |
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| Start bp | 87281 |
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| End bp | 88747 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637810154 |
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| Product | sigma-54 (RpoN) |
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| Protein accession | YP_410785 |
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| Protein GI | 82701219 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA CTCTTCAAGT CAAGCTGTCG CAACATCTGG CGCTTACGCC GCAATTGCAG
CAGTCCATCC GGTTATTGCA ACTCTCCACG ATAGAGTTGA ACCAGGAAAT AGAGCGCATC
GTACAGGAGA ATCCCCTTCT GGAACTTGAT GACAGCCTCG GCAACGACAG TACCGATTAT
CATAGCCTCA TACCGGAGGA GTTGGCCGCA CCGTTGCCAA ACGAGCTGGA GGTTGCCGAG
GAAAGCCTCC CTATTCTCTC CGTCGAAGCA GAAACCGATG TGAAGCAACC GCTTGACGAG
CGGGAGTGGC CGCCGGATGA CAGCGTTTTT CGGCCCTACC GGGACGATGA GGACGAACGT
GATATTCCAC AGCAAGCGGT GGAACCTCCG AATCTCCGTG CCCACCTCAA CTCGCAACTC
AGCCTGAGCC AGATCTCCCA GCGGGATAGA AAGATCACCG GATTACTGAT CGACAGCCTG
GATGATGATG GCTATCTTGT CCAGGACCTG GAAGAATTGG TCGATCTGTT GCCCGCCGAG
CTGTCAATAG ATATCGACGA CCTGCACATT GCCCTCGAAC ATTTGCAGCA CTTGGATCCC
CCCGGCATCG GTGCGCGCAA CTTGAGAGAA TGCCTCGTCA TGCAACTGCA GGCGCTCCCA
CCCGATACGC CCTATCTGGA GCAGGCATTG GCGCTGGTGA ACAACCATCT TGAAAGTCTG
GCATCCCGGG ACTTTGGCGC CATCAAGCGG GTGCTGCACT GCAACGACGA CTGTCTTCGC
TCTGTCCAGC AGATGATAAC GCGACTGAAT CCGAGACCGG CCACGGCCTT CAGCTCCACA
GTCGCCTGCT ACATCGTGCC CGACGTCATC GTGACCAAAG TCGGCGGTTC CTGGGTAGCC
AGCCTTAATC CGGAAGCCAT GCCGCGTCTC AGGATCAACC GGCTCTATGC GGAGATCCTG
AAAGGATGCA ATGACGACTC TACCCGTCGG CTGATCAGCC AATTGCAGGA AGCAAAATGG
CTGGTAAAGA ACGTACAACA GCGTTTCAAC ACCATCCTCA AGGCATCGGC AGCCATTGTG
GAACGCCAGC AGCAGTTTTT CGAGCATGGA GCAGTTGCGA TGCGTCCGAT GATACTGCGG
GAAATCGCCG ACGTGCTGAA TCTGCACGAG TCCACCATTT CGCGGGTTAC CACGCAGAAA
TTCATGCGCA CGCCGCGCGG CATTTTCGAA TTGAAGTATT TTTTTGGGAG CCACGTATCA
ACGGATAGTG GTGGCGCTTG CTCCGCCACT GCCATTCGCG CGCTGATCAA GCAAATGATC
AGTGAGGAAA ACTCGAGGAA GCCGCTCAGC GACAGTCAGA TCTCGGAGGT CCTGGGGCAG
CAGGGTATCA TGGTTGCTCG CCGTACCGTA GCAAAATATC GGGAGTCCTT GCAAATTCCT
TCCGTCAATC TTCGGAAATC GTTTTAA
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| Protein sequence | MKPTLQVKLS QHLALTPQLQ QSIRLLQLST IELNQEIERI VQENPLLELD DSLGNDSTDY
HSLIPEELAA PLPNELEVAE ESLPILSVEA ETDVKQPLDE REWPPDDSVF RPYRDDEDER
DIPQQAVEPP NLRAHLNSQL SLSQISQRDR KITGLLIDSL DDDGYLVQDL EELVDLLPAE
LSIDIDDLHI ALEHLQHLDP PGIGARNLRE CLVMQLQALP PDTPYLEQAL ALVNNHLESL
ASRDFGAIKR VLHCNDDCLR SVQQMITRLN PRPATAFSST VACYIVPDVI VTKVGGSWVA
SLNPEAMPRL RINRLYAEIL KGCNDDSTRR LISQLQEAKW LVKNVQQRFN TILKASAAIV
ERQQQFFEHG AVAMRPMILR EIADVLNLHE STISRVTTQK FMRTPRGIFE LKYFFGSHVS
TDSGGACSAT AIRALIKQMI SEENSRKPLS DSQISEVLGQ QGIMVARRTV AKYRESLQIP
SVNLRKSF
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