Gene Nmar_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1722 
Symbol 
ID5774740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1579343 
End bp1580185 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content32% 
IMG OID641317376 
Productmethyltransferase type 11 
Protein accessionYP_001583056 
Protein GI161529230 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0295021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGTCA AACCATTTGA TTATAAAAAA CGAAACATGG CAGTTTGGAA TGAAGTTGCA 
CCAAGATATC ATAAAAGATG GGCAACAGCA AAAAGAGGAC CATTTCAGAG TACAAAAAAA
CTAGTAGAGT TAATTGATGT CAAAAAAGGA GATCATATTC TTGATGTTGC AAGTGGAACA
GGTGTTGTTA CAAAATTATT AAATCAAAAA GTAGGAAAAT CAGGATTTGT AGTAGGTGCA
GACACTGCAA CTACTGCAAT CAAAGTTGCA AAAAAATGGA ATAAAAAATC TCCTAATCTA
TTATTTGTAA ATGCAGATGC TGAAAATTTC TCATTCAAAG AAAAATTTGA CATTATTACA
TGTCAGTATG CATTGTTTTT TTTCCCAAAT GCCCAAAAGG CTCTAAAAAA CATGAAAAAT
AGCCTCAAAG AATCAGGTAA GTTAGGATTA TCCGTGCATG GACATCCAGA CAGAGTCCCA
TATTTTGATA GTATTTTTGA GGCAGTTACT CAGTTTATTC CAAATTACGT TCCACCTGGA
ACTCCTGATT TTGATAGATT TGGAACCAAA AAAGCACTTA GAGATGAGAT AAAAAAAGCA
GGTTTTAGAA AAATCACAGT AAAGGATTAC AACTTCCCAT ACAGTCCAGG TACTTTTGAT
CAATACTGGA GTAATTATCT TAGATATGTA GCAAAGCCAA TTAAAGAAAA ACTAGATTTA
CTTGAAAGAT CTCAACGAAA AGAACTCAAA GAGAGGGTAA AAGAAAACAC AAAACCTTAC
ACAAAAAAGA ATGGAATAAT TCAATTTCCT TGGGAAGTTT TAATTTTAAC AGCAAAACAC
TAG
 
Protein sequence
MKVKPFDYKK RNMAVWNEVA PRYHKRWATA KRGPFQSTKK LVELIDVKKG DHILDVASGT 
GVVTKLLNQK VGKSGFVVGA DTATTAIKVA KKWNKKSPNL LFVNADAENF SFKEKFDIIT
CQYALFFFPN AQKALKNMKN SLKESGKLGL SVHGHPDRVP YFDSIFEAVT QFIPNYVPPG
TPDFDRFGTK KALRDEIKKA GFRKITVKDY NFPYSPGTFD QYWSNYLRYV AKPIKEKLDL
LERSQRKELK ERVKENTKPY TKKNGIIQFP WEVLILTAKH