| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1635 |
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| Symbol | |
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| ID | 5773219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1490172 |
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| End bp | 1490930 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641317289 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001582969 |
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| Protein GI | 161529143 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACCAT TAAGAGATGA AAACCCACAT CCTCCAGGAT TCAAACCAAA AATTACAATT
GGATTAATCA TACTCAATGT TGTAATATTT TTCTACGAAG TAGCTGTTAC TGGTCAATTT
TGGGAATTTT CTAATCAAAG TGCTGCATTC ATGTTTTTTG AATGGGGAGC AGTTCCTAGT
TGTATTACTG GTTTCTCATC AATGATTCAA CCAGGAATTT CTTGTCCTGA TACTCCGTAC
TTTTCATTGT TTAGTTCTAT GTTTATGCAC GGAGGTTTGA TGCATTTGGG TGGTAACATG
TTATTTTTGT GGATCTTTGG TGATAATATT GAACTAAAAT TTGGCAAAGC AAAATTTCTT
TTAATTTATC TTGCATGGGG AGTTGGTGCG GGTTTTGCCC ACATTGTAAT TGATCCTACA
AGTTCTATTC CTGCAGTTGG CGCATCAGGA GCAATTTCTG GAGTACTTGG CGCATACTTG
GCAATGTTCC CTAGAGTTAG AATTACCACT TTTCTTATGT TGGGTTTCTT TTGGAGAATG
ATGCATATTC AAGCACGATG GTTCTTGCCA TTTTGGTTGG TCTTCCAAAA TCTCTTACCA
TTTTTCATAG GTGGCTTTGG TGTTGCAGGT GGTGGTGTTG CATACATGGC ACACATTGGA
GGATTTGCAA TAGGATTTGC AACTGGTTAT CTCTACAAAA AAACACACAG TTCTGAATAC
ACTTATGGTA CACGATACGG ATACAGACCA GATTATTGA
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| Protein sequence | MLPLRDENPH PPGFKPKITI GLIILNVVIF FYEVAVTGQF WEFSNQSAAF MFFEWGAVPS
CITGFSSMIQ PGISCPDTPY FSLFSSMFMH GGLMHLGGNM LFLWIFGDNI ELKFGKAKFL
LIYLAWGVGA GFAHIVIDPT SSIPAVGASG AISGVLGAYL AMFPRVRITT FLMLGFFWRM
MHIQARWFLP FWLVFQNLLP FFIGGFGVAG GGVAYMAHIG GFAIGFATGY LYKKTHSSEY
TYGTRYGYRP DY
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