Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1612 |
Symbol | |
ID | 5773649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1470160 |
End bp | 1470816 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641317265 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001582946 |
Protein GI | 161529120 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAT CTAGACCTCA TGTTATTCTA AGTGGAGCAA TATCTGTTGA TGGAAAAATT GCAACTAAAA CAAACGATTC AAAACTTTCA TCACAAAAAG ATATTCAAAG ACTTCATAAA TTACGTTCAA GTGTAGATGC AATTCTTATT GGAAAAAATA CCGCATCACG TGATAATCCT CTCTTGACTG TTCGTCATGT TAAAGGAAAA AACCCTATCA GAATTGTTTT AGATTCTAAA GGTACTATTT CAAAAACATC AAAAATTCTT CAATCAAGTA ACAAAGTTCC AACGATAATT GCAATATCTA AAAAAATTAC TAAAAAAAAT CTTGAAAAAC TAGAAAAATT CCCTGTTGAA ATAATTAGTA CCGGTAATGA TTCTGTGAAT TTAAAATTAC TGTTGAAAAA ACTATCAAAA AAGAAAATCA AAACAATACT GGTTGAAGGA GGAGGAACTG TAAACTGGGA ATTTGTAAAA CATAATCTCT TTGATGAAAT GATACTAACG ATATCTCCTT ACTTACTTGG TGGAGAAGAC TCTATTTCCT ATTTACGAGG TACTGGATTT AGCAGAATTT CTCATTCTCC TAATCTCAGA CTCAAATCAG TAAAGAGGCT CAAAAATCAT CTAGTTTTAC ATTACGTAAA GCTCTAA
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Protein sequence | MEKSRPHVIL SGAISVDGKI ATKTNDSKLS SQKDIQRLHK LRSSVDAILI GKNTASRDNP LLTVRHVKGK NPIRIVLDSK GTISKTSKIL QSSNKVPTII AISKKITKKN LEKLEKFPVE IISTGNDSVN LKLLLKKLSK KKIKTILVEG GGTVNWEFVK HNLFDEMILT ISPYLLGGED SISYLRGTGF SRISHSPNLR LKSVKRLKNH LVLHYVKL
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