Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1530 |
Symbol | |
ID | 5773255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1394794 |
End bp | 1395360 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641317181 |
Product | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase |
Protein accession | YP_001582864 |
Protein GI | 161529038 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000000178191 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACAAGT CGTTTGATCT ATACTTTGTA TCCTCAAACT CTCACAAATA CAAAGAGGCA AAAAATATTC TAGATTCCTT TGGAATAAAA TTAGGTTTTC TCAAATTAAC TTTGGAAGAA ATCCAATCCA ATTCTCTAAA AGAGATTGCA GAAAACAAAG CTAAAGATGC ATTTTCTAAA TGTAAAAAAC CAATAATTAT TGAAGATGAT GGTTTATTCA TTGATTCTTT GAATGGGTTT CCAGGTCCTT ATTCATCATA TGTGTTCAGA ACAATTGGCA ACAATGGAAT TCTAAAGCTA CTTTCATCAA AAAGAAATGC AAAGTTTGTT TCTCTTATTA CTTATTGTGA TAAAAAAAAT CTCAAAACTT TTGACGCAAA ATTAGATGGT ACTATTTCAA AATCTCAAAA GGGTAAGGGT TGGGGATATG ATCCAATATT CATTCCAAAA AATTCTAGAA AAACTTTTGC AGAAATTAAT CACAAAAATG AATTATCACA CAGATTCAAA GCATTAAAAA AATTCTCTAA TTGGTATTTA CATAAGCTGG AATCCAACGA TCGATAA
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Protein sequence | MHKSFDLYFV SSNSHKYKEA KNILDSFGIK LGFLKLTLEE IQSNSLKEIA ENKAKDAFSK CKKPIIIEDD GLFIDSLNGF PGPYSSYVFR TIGNNGILKL LSSKRNAKFV SLITYCDKKN LKTFDAKLDG TISKSQKGKG WGYDPIFIPK NSRKTFAEIN HKNELSHRFK ALKKFSNWYL HKLESNDR
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