| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1526 |
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| Symbol | |
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| ID | 5774293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1386804 |
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| End bp | 1388972 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641317177 |
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| Product | thrombospondin type 3 repeat-containing protein |
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| Protein accession | YP_001582860 |
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| Protein GI | 161529034 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000258397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACAAT ATATTTTAGG ATTTTTAATT TTACTTACCA TAACTATTGG AATGACACCA
AACATTGTTT TTGCAAATAC TACAATTGAC ACTGATGGTG ATGGTGTTCC AAATGCTGTT
GATTTTTGTC CTCATCTCTT AGAGGACTAT GATCCTGAAT ACGGTAACAA CATTGACGGC
TGTCCTGCAG ACTTTGTTCC TTGGTATGAT GCTGATTATG ATGGTATCCA AGATCATATC
GATAGATGTC CGACCGTAAA AGAAACTTAC AACAAGTTCC AAGACACTGA CGGTTGTCCT
GATTTGTCCC CTGATGGTGA TACTGGAATT GCTGACTCTG ATGGTGACGG CTTTCCTGAT
TATCTAGACT TGTGTCCAAA TAGACCTGAA ACATTTAATG GAATTGATGA CACTGACGGT
TGTCCTGATG ATGATCATTC TCTACTGGAT CGTGATCAAG ATGGAATTTC TGACGGTAAA
GATGCTTGTC CACTAGAGCC TGAAACTTAC AACTTTTATC AAGATTCTGA CGGCTGTCCT
GACTCTGTTG ACACTACAAC TTCTCTTTAT CAATTTCCAG ATACTGATGG TGATGGAATA
GACGATAGAT GGGATCAATG TCTAAACGAA CCTGAAAACT ATAACAATTT CCAGGATCAA
GATGGTTGTA TTGATATTCC AGGTGTAGAT TCAGAAGGCT TTATCGATTC TGATTTTGAT
AGTATTGGTG ATGATGTTGA TGCTTGTCCA TTAGAACGTG AAAATTACAA CAAGTTCCAA
GATTCTGACG GCTGTCCAGA TGTCTTACAA TTGCCAATTT CTGGTGATGC AGATGGTGAT
GGTTTGTTAA ATGCAAATGA TGCATGTCCA TACAGTCCTG AAACTTACAA CAAGCTCCAA
GATTCTGACG GTTGCCCTGA TTCTCTTACA GATGGCTTTA CTGCCTATGA CTCTGATGGT
GATGGCATTA TTGATAATTT AGATTGGTGT CCAAATCAAC CTGAAACATT TAATGGATTC
CAAGATTCTG ACGGTTGCCC AGATTATTCT ATTTCCACAC TTGACTCTGA TAGAGATGGT
GTTCCAAATG TCTCAGACTC TTGTCCACTA GAGCCTGAAA CTTACAACTT TTATCAAGAT
TCTGACGGCT GTCCAGACTC TGTTGACGGT GTTTTGTTTT CTTATACATT CCCAGATGCA
GATGGTGATG GAATAGATGA TAGATGGGAT GCATGTCTTG ATGAACAAGA GAACTTTAAC
GGATTTTTAG ATTCTGACGG CTGTCCAGAT ACTCCAGGAA TTTCAAAATC TTCATTACTT
GATACTGATT ATGATCATAT CCCTGACGTT CGTGATTCAT GTCCTACTAT TGCAGAAAAT
TACAACAAAT TCCAAGATGA AGATGGATGC CCTGATACAA TAGAACATGA TTCATTTGGA
GATTCTGATG GAGATGGAAT AATTGATAAA ATGGATCAAT GTCCTACCGC AAAAGAAACT
TACAATAAAT TCCAAGATAC TGACGGTTGT CCTGATTCTC TTACAGATGG CTTTACTGCC
TATGACTCTG ATGGTGATGG CATTATTGAT AATTTAGATC TCTGTCCAAC ACAACCTGAA
ACTTACAATA AATTCCAAGA TACTGACGGT TGTCCTGATG ATTCTCGATC TACACTTGAT
TCAGACATGG ATGGAATTCC AAATGTTTTA GACTCTTGCC CACTAGAGCC TGAAACTTAT
AATTTTTATC AAGATACTGA CGGTTGCCCT GATTCTACTG GTACTGTGAC TTCATCCTAT
TCTTTCCCAG ATGCTGATGG TGATGGAATA GATGATAGAT GGGATGCATG TCTTGATGAA
CAAGAGAACT TTAACGGATA CTTGGATTGG GATGGCTGCC CAGATATATT GGCTGCAGCA
CCAACAGCAC CAACAAAATT TGACTCTGAT GGTGACGGAT TCTATGATTC AATTGATTCT
TGTCCATCAA AACCAGAAAC CTGGAATAAA TACAACGATG ATGATGGTTG TCCAGATATT
GCCCCAGAAC AACAAAGATT TGTCCATGAT GATGATCTAG ATGACATCAT TAATGATGAA
GACTTGTGTC CACTTGATCC TGAAGACTAT GATGGTGACA GAGACACTGA CGGTTGTCCA
GATAACTGA
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| Protein sequence | MKQYILGFLI LLTITIGMTP NIVFANTTID TDGDGVPNAV DFCPHLLEDY DPEYGNNIDG
CPADFVPWYD ADYDGIQDHI DRCPTVKETY NKFQDTDGCP DLSPDGDTGI ADSDGDGFPD
YLDLCPNRPE TFNGIDDTDG CPDDDHSLLD RDQDGISDGK DACPLEPETY NFYQDSDGCP
DSVDTTTSLY QFPDTDGDGI DDRWDQCLNE PENYNNFQDQ DGCIDIPGVD SEGFIDSDFD
SIGDDVDACP LERENYNKFQ DSDGCPDVLQ LPISGDADGD GLLNANDACP YSPETYNKLQ
DSDGCPDSLT DGFTAYDSDG DGIIDNLDWC PNQPETFNGF QDSDGCPDYS ISTLDSDRDG
VPNVSDSCPL EPETYNFYQD SDGCPDSVDG VLFSYTFPDA DGDGIDDRWD ACLDEQENFN
GFLDSDGCPD TPGISKSSLL DTDYDHIPDV RDSCPTIAEN YNKFQDEDGC PDTIEHDSFG
DSDGDGIIDK MDQCPTAKET YNKFQDTDGC PDSLTDGFTA YDSDGDGIID NLDLCPTQPE
TYNKFQDTDG CPDDSRSTLD SDMDGIPNVL DSCPLEPETY NFYQDTDGCP DSTGTVTSSY
SFPDADGDGI DDRWDACLDE QENFNGYLDW DGCPDILAAA PTAPTKFDSD GDGFYDSIDS
CPSKPETWNK YNDDDGCPDI APEQQRFVHD DDLDDIINDE DLCPLDPEDY DGDRDTDGCP
DN
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