| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1462 |
|---|
| Symbol | |
|---|
| ID | 5773989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1329980 |
|---|
| End bp | 1331845 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641317110 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582796 |
|---|
| Protein GI | 161528970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT TCTTGGTTGT AATTTTTAGT ATTATCATAA TTACTGTCTC TCCTGCTTTT
GCTGCTATCT CTCTTGACAA ATCCCCATAC ACGTGGACTG ATAAAATCAA CATTAGAATC
ACAGAGCATG GAGTTGATTC AGATGGTGCA TCAGTTAGAG TCTATACTGA AGATCATGAG
ATAAGAAACT ACAAGCTAGC AAAGGCTGGA AACGGATTGT ACACTGGAGA GATAATCTTG
ACTGGATTTT TGCATGATGT AAATGGCGAT GGAAAGTATG ACACAAATCC TCGCACAACG
GGAACTGGAC CTAACAATGG ATTTCTTGAG AGCAGCAGAG ATGATGAATT TACAATTCTA
GTAAGATTTG CAGATGGTGA TGAGATAAAA AAATCTGTAA AAATTAACTG GAATGTCGGT
ACTATGGATT ATACTAGAAT GTTTAATGGA TATGGAGAAT CATTTCTCAT AACAGTCAAT
GATCCTGACA TGAATCTTAA TCCTGATACT CTGGATACAC TTTCTATTCA GGTATTTTCT
GATTCTGATA AAGCAGGACT AGTTATTGAT GCAAAAGAAC TACATGACAG TCCTGGAACT
TTTGTAGCCT ATTTCTCTAC TTCACAAGAT GATTCAAGTG GACGTAGTTT GTATGCACTA
CCTGATGATG TTATCTATGT ACAGTATGAT GACCATACAC TTCCAAAACC CTATTCTGTC
AATGATGATT TAGCTGTATC TGTAGAGTTG CATCCATTTC CATTTGAACA ACTAGATGCT
AAAAATATAG AGTGGAGTCA GGCAAATTAC AGTACAAAAA ATGGTACAAG CTCTGCTAAA
ATTATTGTAA CTGATCATGA GCAAAACAAG TTTGCAAACA GCATTGACAC TGTTAAAGCC
AAAATCCTCT CTGATAGCTC CCTTGAAGGA ATAACAATTG ATCTTTATGA AACAAGTAAA
GATTCAGGAG TCTTTGAGCG TACATTTGCA TTTAGTGACA AACGTTCTGG ACCCAATATT
CTGTATGGAA ATCAAGGAGA TACAATGACT GCACTGTATG ATCCTCAACA ATCAATTGAT
TCGAAAAATT TTCTGACTGC AACTACACTA TTGGGCTCTA CTGGCCCTCC ATTGGAGCGT
GCACCAGTAA GTGCTCCAAG AATATCTGAT CTGAAACACA ACACCATTGT TTATCCTGTA
GTTGGAGAGC AGGTGCTACT TACCTCTGAT ATTGCAAATC AACAAGACCG TGAACAACGA
TTTGTCTGGA TTGCACAAAT TATTGACAGT GACAAAAAAA CTCAAGCATT GTCTTGGATT
GATGGAACCC TAAACCCTCT GTCCTCTTTT AGCCCAGCTA CCTCGTGGAT TCCAAATGTT
GCAGGAGACT ACAGGGTTGT ATTCTTTGTG TGGCAGAGCA TTGAAAATCC TACTGCCTTG
TCTCCTCCAA TAGAATTTGA TTTTACTGTA CTAGATGAGG ATCCTACAAG ACATCACTAT
GAAGAACTTA CTCCTGATGA CTTGGAAGCA AGGCAAAACA TGATTGAAGA ATTGAGAACT
GTTCCTGGAG AAAATAGTAT GGATCATCTA TCTGATGACG CTCGTGATTT TGTGATATCT
GAAGTACTCA AAAATAACAA AGTCTCATCA ATACTTGATG GCTATACATA TGATGTTGAA
TGTTGTTCGT TTTCAGTTGA CAGAAAAAAT CCACCACTAA ATCAACATGT TGGACTGAAA
TTCAATGTTG AAGAAAAATA TCTCTTTGTC ACTGTAACTT TTGATTTGAA ACAAGAAAAA
ATTACCGCAA TTCTTAAGGG TTCTAGTGAT GGATTTTCAA TAATACCTGT TGATGATAAA
AAATGA
|
|---|
| Protein sequence | MKFFLVVIFS IIIITVSPAF AAISLDKSPY TWTDKINIRI TEHGVDSDGA SVRVYTEDHE
IRNYKLAKAG NGLYTGEIIL TGFLHDVNGD GKYDTNPRTT GTGPNNGFLE SSRDDEFTIL
VRFADGDEIK KSVKINWNVG TMDYTRMFNG YGESFLITVN DPDMNLNPDT LDTLSIQVFS
DSDKAGLVID AKELHDSPGT FVAYFSTSQD DSSGRSLYAL PDDVIYVQYD DHTLPKPYSV
NDDLAVSVEL HPFPFEQLDA KNIEWSQANY STKNGTSSAK IIVTDHEQNK FANSIDTVKA
KILSDSSLEG ITIDLYETSK DSGVFERTFA FSDKRSGPNI LYGNQGDTMT ALYDPQQSID
SKNFLTATTL LGSTGPPLER APVSAPRISD LKHNTIVYPV VGEQVLLTSD IANQQDREQR
FVWIAQIIDS DKKTQALSWI DGTLNPLSSF SPATSWIPNV AGDYRVVFFV WQSIENPTAL
SPPIEFDFTV LDEDPTRHHY EELTPDDLEA RQNMIEELRT VPGENSMDHL SDDARDFVIS
EVLKNNKVSS ILDGYTYDVE CCSFSVDRKN PPLNQHVGLK FNVEEKYLFV TVTFDLKQEK
ITAILKGSSD GFSIIPVDDK K
|
|---|
| |