Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1385 |
Symbol | |
ID | 5774475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1267663 |
End bp | 1268718 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641317031 |
Product | radical SAM protein |
Protein accession | YP_001582719 |
Protein GI | 161528893 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATC TTTATCGATT ACTTCCTGAG GAAATGGAAA AATTAGTAAT TGATATGGGT TATGATAGAT ACAGAGCAGA CCAAATCTTA CTTCCACTCT ATTACAAATT CCCAAAAGAC ATTAACGATA TTCCTCAACT TCCAAAAAAA TTACGAGAAG AATTTACAGA AGCAGGCTAC ACCATTGGTT CAGCAAAAGA AATTCATCGT GTCGTAAGTG ATGATGGTGA TACTACTAAA TTATTGTTGG AACTATCTGA TGGCTCTTCA GTTGAAACTG TTCTAATGCA ATACGAGCCA ACAAAAATTG GTGGTCATCC AAGATCAACT ATCTGTGTTT CAACACAAAT AGGGTGTGCA ATGGGTTGTG TATTTTGTGC AACTGGACAA ATGGGTTTTG AAACAAATCT AAAAGCTGAA CACATTGTAT CTCAAGTAAT TCATTTTGCT GAACTTTTAG AACAACGTGG AGAACATGTT ACAAACCTGG TCTTTATGGG AATGGGCGAA CCAATGGCAA ATTATGATGA AATGATTCGA GCTGTAAAAA TTCTAACACA TGACAGAGGT TTTGGATTAG GACAAAGACA CATTACAATT TCTACTATTG GCATTACATC TGGAATTGAA AAACTAGCTG AAGAAAATCT TCAGATTGGT CTTGCCATTT CGCTTCATGC ACCGAACAAT GAATTACGAA AAAAACTTGT TCCAACTGCA GGACCTAACT CTGTTGAAGA CATCATAAAA TCTGGACGAG ATTATTTTAA AAAAACTGGA CGACGTGTCA CATTTGAGTA TGCTCTGATG GAAGGAGTCA ACGACTCTCC GGAAATTGCT CATGAACTTG CAAGACTTTT GAGAGGAAAC GGCTCACACG TCAACATTAT TCCAATTAAT CCTACTGCTG GTGACTTTAA GCGTCCATCT GAGAAAAATG TCTTAGAATT TGAGCAAATA TTGCGAAAAT CTGGCGTAAA TTGTACTGTA CGTGTGGAAA AAGGTACAGA GATCTCAGCT GCCTGTGGAC AACTACGAAC CGATATTGTA GGTTAA
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Protein sequence | MTDLYRLLPE EMEKLVIDMG YDRYRADQIL LPLYYKFPKD INDIPQLPKK LREEFTEAGY TIGSAKEIHR VVSDDGDTTK LLLELSDGSS VETVLMQYEP TKIGGHPRST ICVSTQIGCA MGCVFCATGQ MGFETNLKAE HIVSQVIHFA ELLEQRGEHV TNLVFMGMGE PMANYDEMIR AVKILTHDRG FGLGQRHITI STIGITSGIE KLAEENLQIG LAISLHAPNN ELRKKLVPTA GPNSVEDIIK SGRDYFKKTG RRVTFEYALM EGVNDSPEIA HELARLLRGN GSHVNIIPIN PTAGDFKRPS EKNVLEFEQI LRKSGVNCTV RVEKGTEISA ACGQLRTDIV G
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