| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1348 |
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| Symbol | |
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| ID | 5774692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1234431 |
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| End bp | 1234745 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641316993 |
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| Product | translation initiation factor eIF-1A |
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| Protein accession | YP_001582682 |
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| Protein GI | 161528856 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
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| TIGRFAM ID | [TIGR00523] eukaryotic/archaeal initiation factor 1A |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.022956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAAAC GCCAAATAAA AAACGAAAGT GCTCTAAAAA AGATCAAACT TCCTGAAACA
CAGGAGGAGA TGTTTGGCAG AGTTATCAAA ATGATGGGCG GAGAAAATGT CATGGTAAAA
TGCTCTGACA ACATAGCAAG AAGAGGAAGG ATAAGAGGTA AGCTGAAAAG AAGGGTATGG
ATCAGAGACA ACGACGTGGT AATCATTGCG CCTTGGGAAT TTGGCAAGGA ACAAAGAGGA
GATATTTTAT GGAGATATAC ATTGCCTCAA GTAGACTGGT TAAAACAAAA CAAGTACATC
CCGTTGGATT TTTAG
|
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| Protein sequence | MGKRQIKNES ALKKIKLPET QEEMFGRVIK MMGGENVMVK CSDNIARRGR IRGKLKRRVW
IRDNDVVIIA PWEFGKEQRG DILWRYTLPQ VDWLKQNKYI PLDF
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