Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1261 |
Symbol | |
ID | 5773162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1157471 |
End bp | 1158739 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641316905 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | YP_001582595 |
Protein GI | 161528769 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA TATTTGTAGA ATCTTATGGA TGTTCTGCAA GCTTTGCAGA CTCTGAAATG ATTTCAGGAT TAATTCTAAA CGGAGGACAT ACTTTGGTAG AAGATTCTTC AGAATCAGAT CTCAATGTTG TGGTAACATG TTCTGTAAAG GATGCGACTG CAAACAAGAT GGTTCACAGA ATAAAGTCAC TAAAGACAAA GCCTCTAGTT GTGGCAGGAT GTCTACCAAA GGCAGAAAAA GAAACTGTAG AAAAGTTTTC TGAAAATGCA AGTCTACTTG GTCCAAATTC TTTAGGAAAG ACTCTCCAAG TTATTGATTC CACACTCAAA GGAAGGAAAA AGATTGCATT AGAAGACACT GATCTCTCAA AAGTTGGGCT GCCCAAAGTC AGATTGAATC CAGCAGTAGG AATAGTTGAA ATTGCAAGTG GATGTATGAG TGAATGTACA TTTTGTCAAA CTAAGATTTC AAAAGGCGAT CTTCAAAGCT ACAGACTAGG AGACATTGTA AGACAAGTAA AGACAGAGAT CAATGAAGGA TGTAAAGAAG TCTGGTTAAC ATCAACAGAC AATGGATGTT ATGGATTTGA CATTGGAACA GATTTACCTT CTTTGATTAA TGCAGTGTCA GAAATTCCTG AAGAGTTTAT GATTAGAGTT GGAATGATGA ATCCAATGTA CATGCCACGA ATCAAAGAAA AGTTAATTGA ATCATATGAT AATGACAAAG TCTTCAAGTT CCTACACATT CCAGTACAAA GTGGAAGTGA CAAAGTTCTA CATGACATGA AAAGAGGACA TACTGCTGGA ACCTTTAGGG AGATTGTAAA GAAAGCAAGA GAGAGATTCC CAGACTTTAC CATTTCAACT GACATCATAG TTGGATTCCC ATCAGAGACC AAAGAAGACT TTGAGAAAAC AGTAGAACTG CTTGATGAGA CAAGACCAGA TGTTGTAAAT CTCTCAAAAT ATAGCGCTAG GCCTGGAACA GAAGCTGCTG AATGGGAGCA AATTGATGTT GCAGAAGTAA AATCAAGAAG TAAGAGAATT TTTGAGCAGA TCAACAAAAT ATCATTGGAG AACAACAAAA AGTGGATCGG TTGGAAAGGT GACGTTCTCT TTGATGAGCA GACAGATGAG GGAATCAAAG GTAGAAACTT TGCTTACAAG CCAGTCTTTG TCCCTGAACA AGTAGACATT GGTCAATTAC ATGCAGTTGA GATCATTGAT GCTACTCAAA ATAGCCTTCT TGGAAAGATC GCAAGCTAA
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Protein sequence | MAKIFVESYG CSASFADSEM ISGLILNGGH TLVEDSSESD LNVVVTCSVK DATANKMVHR IKSLKTKPLV VAGCLPKAEK ETVEKFSENA SLLGPNSLGK TLQVIDSTLK GRKKIALEDT DLSKVGLPKV RLNPAVGIVE IASGCMSECT FCQTKISKGD LQSYRLGDIV RQVKTEINEG CKEVWLTSTD NGCYGFDIGT DLPSLINAVS EIPEEFMIRV GMMNPMYMPR IKEKLIESYD NDKVFKFLHI PVQSGSDKVL HDMKRGHTAG TFREIVKKAR ERFPDFTIST DIIVGFPSET KEDFEKTVEL LDETRPDVVN LSKYSARPGT EAAEWEQIDV AEVKSRSKRI FEQINKISLE NNKKWIGWKG DVLFDEQTDE GIKGRNFAYK PVFVPEQVDI GQLHAVEIID ATQNSLLGKI AS
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