| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1242 |
|---|
| Symbol | |
|---|
| ID | 5773102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1137977 |
|---|
| End bp | 1138813 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641316886 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582576 |
|---|
| Protein GI | 161528750 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1630] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAATA CAGTATACAA AGATGCCATA ATCAATAGAG ACAAAATGTT GTCTATTCTA
AAGGGCCCAA AATTTGAACA AATAATACAA AAAGCAAGAG AAAATTGGGT AGAATTTACG
CCTGTAAAAG AAGAAGTCGT TACTGCAGGC ATTGATTCAA GTTTTAACAA CACAAAATTC
CAAGGAATTG AGCTTTGGGC AACTACAGCA GTATCCATCA AGGCAGATGG AGAAGTGTTA
GTTGATTTAC ATGAATCAGG ATTAGGCTCA GATACTGATC TTTCACGAAT TGCAAGTAAG
ATGGAAATTG ACGCGTGTGA GAAAACAGTG GATCAAGTAG ATTTGGTACT GATGGATGGG
TCTTTGCATT CTCAGTTTAT GACAAGACAA TCAGCTTTGG ATGCACAGGT AGTCAGAACA
ATGAAAAAAA GAGACAATGT GATTTTTATT GCAAAAACAT CAAACACAAA AAAACAATTT
GAGAAATTAG GTTCACTTGC TGGAGATATT TTTTACTATA ATCATGTAAC AAATAATCCA
GGATTTAGTA AATTATTTGT AGAAAAAAAA TATGGTTCAG ATAAGGTCAT TTCATCTACA
TTTGTAAGAT TAAGTGATTC AACTCCAATT ATCAAATTAG AATTTCTTGG AGAACAACAT
GGTGAAGGTG ACATAAAGTC AGTCATGAAC AAATTATACA AAACAAGTAT TGGTGGATAT
CCATATGCAC TAAAGCTTGC ACATAATAAC TGTAAAATAT CTGATAAAGA ACTTGCAAAA
ATGGTTAGTT TGTTAGGTCT AAGTAATGAG ATCGGTTCAC GTGAGGTATT AGGTTGA
|
|---|
| Protein sequence | MLNTVYKDAI INRDKMLSIL KGPKFEQIIQ KARENWVEFT PVKEEVVTAG IDSSFNNTKF
QGIELWATTA VSIKADGEVL VDLHESGLGS DTDLSRIASK MEIDACEKTV DQVDLVLMDG
SLHSQFMTRQ SALDAQVVRT MKKRDNVIFI AKTSNTKKQF EKLGSLAGDI FYYNHVTNNP
GFSKLFVEKK YGSDKVISST FVRLSDSTPI IKLEFLGEQH GEGDIKSVMN KLYKTSIGGY
PYALKLAHNN CKISDKELAK MVSLLGLSNE IGSREVLG
|
|---|
| |