| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1194 |
|---|
| Symbol | |
|---|
| ID | 5773998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1090267 |
|---|
| End bp | 1090794 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641316838 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001582528 |
|---|
| Protein GI | 161528702 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAAGA AGAAAAGTCA GTTCTTCAAA ATACCTCTGT TGAGCATTCA AATTCTACAA
TATGAGTTCC TAGGACCTAT TCCTCTTGAT GAATGGGGGC CACCAATGGA AAAACTAGTG
TTTTTGATAA TGTCTAGGGA TAAAGACCGA TTCAACATTG TTTATGCTGG TGACTGTGAA
AAAACAGACG ATAAATCATT TTTTGTCCAA CATCCAGGTT TCAAATGCTG GGTTGAAAAA
TCAGGCTCTG AAAAGTCACT ATATCTTGCA ATATTGCCTT TGTTTGATGC AAGTAAAGAA
CATCGAGAAA GTGTACTAAA CAAAATCAAA GTACGTTACA ATCCTTCATG CAATGTAGGT
GAGATTGTTG AACCAAAACC CGATTATGTT GTTCGAAAAT CCCCCGAACC TGAAAAATTC
TCTTGTCCTT GTTGCGGATC TGAAATGAAA GCAGAACAGT TTTTAGAAAA ATCGACACTT
TACAGATGTA GTAGTTGTGG CATCAGCGAC ACTAAACTTA ACTCTTGA
|
|---|
| Protein sequence | MEKKKSQFFK IPLLSIQILQ YEFLGPIPLD EWGPPMEKLV FLIMSRDKDR FNIVYAGDCE
KTDDKSFFVQ HPGFKCWVEK SGSEKSLYLA ILPLFDASKE HRESVLNKIK VRYNPSCNVG
EIVEPKPDYV VRKSPEPEKF SCPCCGSEMK AEQFLEKSTL YRCSSCGISD TKLNS
|
|---|
| |