Gene Nmar_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1193 
Symbol 
ID5774294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1088792 
End bp1089826 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content36% 
IMG OID641316837 
Productalcohol dehydrogenase 
Protein accessionYP_001582527 
Protein GI161528701 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TGCGTGCAAT GGTGCTGTCT GAATGTGCAG CAATTGAGAC AAATCCACTA 
AAGTTAACAG AAATTGATAG ACATAAAATT GAAAGATCAA ATGAAATTTT ACTAAAAATT
GAGGCATGTG GAGTTTGCCA TTCACAATTA CATGGAATAG AAGGTGATTG GAAAGATCTT
GGAATTCCAC CACAATTACC AACAGTTCCA GGACATGAAG TTGTAGGAAA AGTAGTTGAG
ATTGGAAGTG GAGTTACAAA GTTCAAAGTA GGAGACAGAG CTGGAATTAC ACCATTACTA
GAAGCATGTA AAGAATGTCA ATATTGTAAA GAAGGAAAAG AGTACTTGTG TGAATCTTCA
ATTATTCTAG GTGAAACTCT CAAAGGAGGA TATTCAGAAT ACGTAACAGT TACTGAAGAC
TTTGCAACCA AAGTACCAGA CTCTATGAAA CCAGAGTATG CAGCACCATT ATTTTGTGCA
GGAATTACAG CTTACAAAGC AGTAAAAGCT GCAGAACCAC AAACTCACAA AAAAATTGGA
ATTTTTGGAA TTGGTGGAGT AGGACACATG GCTGTACAGT TTGCAAAAGT ACAAGACTGT
GAGGTTATTG CATTTTCAAG GTCTCAAAGT CACCTAGATG TTGCAAAGAA ACTAGGGGCA
ATTGACGCCA TACAGTTTTC TGAAAATCAA GAAGAATTTT TAGAAAAATT AAAAGAAAAA
CATGGACTGC TTGATGCTGC AATTGTTTTT GCACCTGCAG ACATTATAAC AGATACTGCA
ATCAGGGCCA TAAAGAAGGG AGGAATGGTA GTAATTGCGA CAATTGGTGA GAATCCATCT
TTTGTAGCAT TTGAAGAAAA GACAATCAGA GGAACTTTGA TTGGTTCAAC TAAAGACATG
GAAGAAGTAA TCAAGACATG TAATGAAAAA AATATCGAGG TAGTATCTGA AGTATTTCCA
CTAGAGGATG CAAACAAAGT TCTCAAAAAA TTAAAAGATT CAGAGATTGA AGCTAGAGCA
GTTTTAATTC CTTAA
 
Protein sequence
MDKMRAMVLS ECAAIETNPL KLTEIDRHKI ERSNEILLKI EACGVCHSQL HGIEGDWKDL 
GIPPQLPTVP GHEVVGKVVE IGSGVTKFKV GDRAGITPLL EACKECQYCK EGKEYLCESS
IILGETLKGG YSEYVTVTED FATKVPDSMK PEYAAPLFCA GITAYKAVKA AEPQTHKKIG
IFGIGGVGHM AVQFAKVQDC EVIAFSRSQS HLDVAKKLGA IDAIQFSENQ EEFLEKLKEK
HGLLDAAIVF APADIITDTA IRAIKKGGMV VIATIGENPS FVAFEEKTIR GTLIGSTKDM
EEVIKTCNEK NIEVVSEVFP LEDANKVLKK LKDSEIEARA VLIP