Gene Nmar_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1175 
Symbol 
ID5774535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1073932 
End bp1074471 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content33% 
IMG OID641316818 
Productinorganic diphosphatase 
Protein accessionYP_001582509 
Protein GI161528683 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA ATTTTTGGCA CGATATAGAA TCAGGAGCAG ATATTCCTGA AATTATCAAT 
GTAGTAGTAG AGATTCCTAA AGGTTCTATG AACAAATACG AATATGATAA AAAACACAAC
ATGATAAAAC TTGACAGAGT TTTATTTTCA CCATTTCATT ATCCAGGCGA TTATGGATTA
GTTCCTCAAA CACTTTCTGA GGATGGGGAT CCGCTGGACG CACTAGTACT TGTTACAAAC
CCAACTTATC CAGGAATTCT AATTGAAGCT AGACCAATTG GATTACTTCA AATGAAAGAT
GCAGGAGATT TAGATGACAA GATTATTTGC GTCTCAACAA ATGATCCAAG ATATTTACAT
ACTACAGATA TTTCAGACAT TGAAGATCAT TATCGTTCTG AAATTGCACA TTTTTTCCAA
GTGTACAAAG ATTTGGAAGG GAAAAAAGTA GAGATACTAG GATGGCAATC AGCAAAAGAA
GCAAAGAGCA TAATTGTTGA ATCAATTAAA AGATACAAGA ATACTTTGAA GAAATTTTAA
 
Protein sequence
MSKNFWHDIE SGADIPEIIN VVVEIPKGSM NKYEYDKKHN MIKLDRVLFS PFHYPGDYGL 
VPQTLSEDGD PLDALVLVTN PTYPGILIEA RPIGLLQMKD AGDLDDKIIC VSTNDPRYLH
TTDISDIEDH YRSEIAHFFQ VYKDLEGKKV EILGWQSAKE AKSIIVESIK RYKNTLKKF