| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1037 |
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| Symbol | |
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| ID | 5773689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 910852 |
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| End bp | 912618 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641316679 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_001582371 |
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| Protein GI | 161528545 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTT CTATCTTAGC TGATTCGTTT AACAAGATGG AATCAACTAG AAAAAGATTA
GAACTAACAC AGTACTTGGT AGAATTATTT AAAAAAACTC CACAAGAAGT GATTTCAAAG
ATAGTCTATT TACTTCAAGG AAAACTAAGA CCAGACTTTG AAGGAGTGGA GTTGGGAGTT
GCAGAAAAAC TTGCAATAAG AGCAATCTCA AAATCTTCAG GAATACCAAT TAAAAAAATT
GAAGAAGAAT ACAGAAAAGG TGGAGACTTG GGGCATGCAG CCACTACAAT TCTAGAGCAA
AAAACGCAGA CAACATTTCT CGTAGAAGAC ATTACAGTTG AACGAGTCTA TGAGACATTA
TTCAAGATTG CAAAGTTAGA GGGCAATAGA TCACAAGACA TGAAGATGAA ATACATTTCA
AGCTTACTTA ATGATGCAAG TCCGTTAGAG GCAAGCTTTA TTCTAAAAAT ATTGTTAGGT
ACACTAAGAC TAGGAATTGC AGAAAATACT GTAATGGATG CATTAGCATT AGCATTTTCA
GGCAACAAAG AAAATAGAAA AATTTTGGAG CATGCATACA ATGTTTCTAG TGATTTGGGA
AAAGTTGCAG AAGTTTTAGC AACTGAAGGA TTAGCAGAAG TTGAAAAATT CAAAATAATT
TTGTTTAATC CAATCAGACC AATGCTTGCA GACAGAGTAA AGAGCGAACA AGAAGCAATT
GAAAAAATGG GGAATGAATT TGCAGCTGAA TACAAATTAG ATGGAGAAAG AGTACAACTA
CACATAGAAG GAGACAAAGT AGTTTTATTT TCAAGAAGTT TAGAAAATAT TTCAAGTTAT
TATCCAGATA TTATAGAAAA AATTCCAAAA ACAATTCAAG CAGAAAATAT TGTACTAGAG
GCAGAAGCAG TAGCAATCAA TGAAAACACA GGAGAGTTTT TGCCATTTCA AGAATTAATG
CATAGAAGAA GAAAATACAA AATAGAAAAA GCAGTTACAC AATATCCCAT AACGGTAAAT
CTCTTTGATA TCTTGTATTG TAATGGAAAG AGTTGTCTTG AATTAGACTA TAAAGAAAGA
AGAGAAAAAA TGGAAAAAGT GGTAAAAGAA GATGATTTTG TAAAGCACAT TCCCATGGCC
ATTGTCAAAA ATGAAAATGA TATTGAAGAC TTTTTTGAAA ACAGCATCAA TGCAGGAAGT
GAAGGACTAA TGCTAAAGAC GCTTGTTAGT CCATATCAAG CAGGTTCAAG AGGAAGTCAC
TGGTTAAAAC TGAAAAGAGA ATATCAAAAT GAACTTGGAG ATAGTTTAGA TCTTGTTGTG
ATAGGAGGAT TCTTTGGGAA AGGAAGACGG ACAGGAAACT ATGGAACTTT ATTGTTAGCA
ACATACGAAG AAGATGAAGA TACATTCACC AGCATTTGTA AAGTTGGAAC AGGTTTTTCA
GATGAAGATT TAGATCAATT ATATCAAATT CTAAATCCCA AAGTAACAAT CAAGAAAAAT
CCGCGTATTA ATAGTGAAAT GGAAGCAGAT GTTTGGTTTG AACCAGAATT AGTAATAGAG
GTGGTTGCAT CAGAGATTAC ACTTAGTCCA ATTCACAAAG CAGCTAGAGA CAAAATTAGA
AAGGGAGCAG GACTTGCATT GAGATTTCCA AAATTTACAG GAAAGATGAG AGTTGAAAAA
ATGGCAGAAG ATGCATCTAC TAATGAAGAA GTGATCACAT TATACCAAGG TCAGAAAAAA
GTGGCACATG ACAAAAGTCT CATGTAA
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| Protein sequence | MEFSILADSF NKMESTRKRL ELTQYLVELF KKTPQEVISK IVYLLQGKLR PDFEGVELGV
AEKLAIRAIS KSSGIPIKKI EEEYRKGGDL GHAATTILEQ KTQTTFLVED ITVERVYETL
FKIAKLEGNR SQDMKMKYIS SLLNDASPLE ASFILKILLG TLRLGIAENT VMDALALAFS
GNKENRKILE HAYNVSSDLG KVAEVLATEG LAEVEKFKII LFNPIRPMLA DRVKSEQEAI
EKMGNEFAAE YKLDGERVQL HIEGDKVVLF SRSLENISSY YPDIIEKIPK TIQAENIVLE
AEAVAINENT GEFLPFQELM HRRRKYKIEK AVTQYPITVN LFDILYCNGK SCLELDYKER
REKMEKVVKE DDFVKHIPMA IVKNENDIED FFENSINAGS EGLMLKTLVS PYQAGSRGSH
WLKLKREYQN ELGDSLDLVV IGGFFGKGRR TGNYGTLLLA TYEEDEDTFT SICKVGTGFS
DEDLDQLYQI LNPKVTIKKN PRINSEMEAD VWFEPELVIE VVASEITLSP IHKAARDKIR
KGAGLALRFP KFTGKMRVEK MAEDASTNEE VITLYQGQKK VAHDKSLM
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