Gene Nmar_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0858 
Symbol 
ID5774290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp754081 
End bp754617 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content32% 
IMG OID641316497 
ProductATP--cobalamin adenosyltransferase 
Protein accessionYP_001582192 
Protein GI161528366 
COG category[S] Function unknown 
COG ID[COG2096] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00636] ATP:cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000207214 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTT ACACTAAAAC AGGAGATGAT GGAAATACTG GACTACAAGG AAATTTACGT 
ATCTCAAAAT CTCATCCGAG AATATTTGCA TATGGTGCTG TAGATGAAGC AAATGCTGCT
TTGGGTATTG TGTTAACAAA TTCTTTAGAT GAAGATATCT TTGATGTACT TAGAAAAATT
CAAAATGATT TGTTTGTTGT AGGTTCTGAT TTATCTAATC CTAATCTAAA TGATGTAAAA
AACAGAGTTT CCTTAGAGAT GATACAAGAG TTGGAGCAAA ATATAGATAA ATTTGAATCA
GAACTCCCAC CACTAACTAA TTTTATACTT CCAGGAGGCT CTACTCCTAC ATCTAAATTA
CATTATGCCA GAACTGTAGT ACGTAGAGCT GAAACCCTAA CTGTCCAACT TGCAGAAAAA
GATGAAATTA ATTCAAACTG TATAATTTAC CTAAATCGAT TATCTGATCT ATTTTTTGTT
ATGGGCAGAT TGATCAACAA AAGAAATGGT ACGGAAGACA TTATTTGGAA GATCTAA
 
Protein sequence
MKIYTKTGDD GNTGLQGNLR ISKSHPRIFA YGAVDEANAA LGIVLTNSLD EDIFDVLRKI 
QNDLFVVGSD LSNPNLNDVK NRVSLEMIQE LEQNIDKFES ELPPLTNFIL PGGSTPTSKL
HYARTVVRRA ETLTVQLAEK DEINSNCIIY LNRLSDLFFV MGRLINKRNG TEDIIWKI