Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0817 |
Symbol | |
ID | 5773892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 721209 |
End bp | 722318 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641316455 |
Product | redoxin domain-containing protein |
Protein accession | YP_001582151 |
Protein GI | 161528325 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.234537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCAG AAATTAAAAC CGCATTAATT TTAGGAATTG TGATTGCCGT GGGAATAGGA ATTACAAGTA TTGTTTTTTC TACAATTGAA AACAATATTC AAACAGCCAA TAACTTTGAT AGTGCAAATT CTGCTAGTAA AATAGACAAA TCAGGCTTCA AAAAAGCACC TGATTTAGTA GGAATTGCCC ACTATCTGAA TACAACTCCT GAAGAATTAG CACAAGAGAT TGAAGGCAAA GTAGTGCTAT ATGACATTTG GACATATAGT TGCATTAATT GTATCAGAAC TTTACCATAC ATCACAGCTT GGGATGACAA ATATTCTGAT CAAGGATTGT TAATTGTTGG AGTACATTCT CCAGAATTTG AATTTGAAAA AGTCCCTGAA AATGTACAAA TGTCAATTGA AAAACACGGA ATCAACTATC CAGTTGTAAT GGATAACGAT ATGGAAACTT GGAAAGCGTT TGAAAACAGA TACTGGCCAA GAAAATACAT TGCAGATCAT GAAGGTTACA TTAGATATGA TCACATAGGA GAAGGAGGAT ATCAAGAAAC TGAAAAAATT ATTCAACAAT TAATCAAAGA AAGATCTGAT TCATTAGGAA TTCAAATGGC ATCTGCTTTA TCATTAGTTG ACATTGAAGA GTTTGAACAT ACATTGTTTA GAACACCAGA GTTATACTTT GGATATTACT TTGCACAAAA CAGAAATCAA TTAGGTAGTG AAGAAGGATT CCAGCCAGAA AAAACAGTTG TGTATGAAGA GTCAGATAAA ATAGAATTAC ACAAATTCTA CCCAATTGGA ACATGGAAAA ACCATGAAGA CAGTATGGAA TTGATTTCTG AGGAAGGAGA AATTAAATTG TTGTATAATG CAAAAGAGGT AAACATTGTG ACTGCAAATA ATGCAGAACT AGAGATTTAT CTTGATGGAG AAGCATTACC AGTGCAATAC TCTGGCAATG ACATTATATC TGGAAATACT CTAAGTGTTT CTGAACCAGG ACTATACAAC ATCATTACCA ATGAAGAGAG TGCATCCCAT GTATTGGAGT TAAAAGTCAA GGGTAAGGGA TTCCAGATAT TCACATTTAC CTTTGGGTAG
|
Protein sequence | MKSEIKTALI LGIVIAVGIG ITSIVFSTIE NNIQTANNFD SANSASKIDK SGFKKAPDLV GIAHYLNTTP EELAQEIEGK VVLYDIWTYS CINCIRTLPY ITAWDDKYSD QGLLIVGVHS PEFEFEKVPE NVQMSIEKHG INYPVVMDND METWKAFENR YWPRKYIADH EGYIRYDHIG EGGYQETEKI IQQLIKERSD SLGIQMASAL SLVDIEEFEH TLFRTPELYF GYYFAQNRNQ LGSEEGFQPE KTVVYEESDK IELHKFYPIG TWKNHEDSME LISEEGEIKL LYNAKEVNIV TANNAELEIY LDGEALPVQY SGNDIISGNT LSVSEPGLYN IITNEESASH VLELKVKGKG FQIFTFTFG
|
| |