Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0778 |
Symbol | |
ID | 5773645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 695334 |
End bp | 695756 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641316415 |
Product | signal transduction protein |
Protein accession | YP_001582112 |
Protein GI | 161528286 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0404956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCATG TACGAGACAT CATGCAAAAA AATGTCATAA CTATTGAATA TGATAAAACA GCACATGATG CAGCAAGTAT TCTAAAAGAA AAAGAGATCA GTTTTTTGGT AATAATTAAA GATGAAAAGC CAATAGGAGT TATTTCAGAA AGAGACATTG TTCAAAAAGT AACAGCTGAA GATCAAAAAG CATCATCAGT TTTAATTGAA GATATCATGT CAAAGAAATT TCGATGGGTC AGTCCAGACA CACCAATTGA AGACGCTGTT CAAAAGATGT TAAATAACAA TATTCGCAGA CTAATCATTC TTGAAGATGA AAAACTAGTA GGAGTCATCA CTCAAACAAA TTTGGCAGAG TTTTTACGCA GTAAACTCTT GATTAATGGA ATGTTAGATA ACATAGATTC TGAAAAATCC TAG
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Protein sequence | MAHVRDIMQK NVITIEYDKT AHDAASILKE KEISFLVIIK DEKPIGVISE RDIVQKVTAE DQKASSVLIE DIMSKKFRWV SPDTPIEDAV QKMLNNNIRR LIILEDEKLV GVITQTNLAE FLRSKLLING MLDNIDSEKS
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