| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0622 |
|---|
| Symbol | |
|---|
| ID | 5774226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 563679 |
|---|
| End bp | 563987 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641316257 |
|---|
| Product | translation initiation factor SUI1 |
|---|
| Protein accession | YP_001581956 |
|---|
| Protein GI | 161528130 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
|---|
| TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAA TTTGTAATAC TTGTGGTCTT CCTGAAGACT TGTGTGCATG CGGTGAACTT
GCCAAAGATA GCACCAAAAT TATAATTCGA TTAGAAACAA GACGGTTTAA GAAAAAAGGT
ACTATGATTG AAGGCTTGGA TCCTAAACTA AATAATTTAG AAACTGTTGC AAAGGAACTA
AAAAGCAAGT ATGCGTGTGG TGGAACTGCC AAAGAAGGCT ACATTTTCTT GCAAGGTGAT
CATCGTGACA CCATCAAAGA TACTCTAACT GATCTAGGCT TTGCTGAAGA AAGTATCGAG
TTACACTAA
|
|---|
| Protein sequence | MAVICNTCGL PEDLCACGEL AKDSTKIIIR LETRRFKKKG TMIEGLDPKL NNLETVAKEL
KSKYACGGTA KEGYIFLQGD HRDTIKDTLT DLGFAEESIE LH
|
|---|
| |