Gene Nmar_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0559 
Symbol 
ID5773378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp500703 
End bp501698 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content42% 
IMG OID641316192 
Producttrans-sialidase 
Protein accessionYP_001581893 
Protein GI161528067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.290745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA AGCGAAAAGC AAGTACAAAA AAAGATCTTG AAGCAAAGAT CGCCGAACTC 
GAAGCAAAAC TATCTAAACT ATCATCAGAA ATTGATGCCA AACCTGCTGA GACAAAACCA
GCTGAAGTGA AACCTGCTGA GACAAAACCA GCTGAAGTGA AACCTGCTGA GACAAAACCA
GCTGAAGTGA AACCTGCTGA GACAAAACCT GCAGAAACTA AACCAGCTGA GACAAAACCA
GCTGAAACTG CAAAACCAAA ACCAACCTTG CCAAAAGGTA TGGGTGAAAA ACCAGCAGAA
GCTCCTAAAC CAGAGGAATC TCCAAAACCA GCTGAGACAA CAGCACAACC TCCAGCAACT
CCTAATGAAG CTCTAGAATC TGCATACTAT GATGCTCCAA TGACTGACTT CCATCAGTAT
AGAGCAAAAG TAACAGGTTA TTCTCCAGCT CCTAACAGAT ACTTTGTTAG AATGACTGCT
CCTGTTGGTA AAGTTCCAAC ATCTGATTGG AATCAACAAA AAGCATCAGT CACTGGTTAC
ACAGCATGTT CAAACCAATA CTATGCAACA AGAGCAAGAT TGGCATATCA TCCTGCTGAC
AAAAGATTTG GAACTTTTAG TGGAGTTAAC ATGAGTTTTG ATGGTGTTCA AATTAAAGAA
CAAACACAAC AAGCACCTCC ACCACCTCCA GAACCTGCAA AACCAAAAGG TACACTTCCA
AAAGGAATGG GTGATGCACC TCAACCTCAA ACTACTGCAA GTAGTGGAGA TGGAAAATCA
AGACAAGAAC AACTAGAAGA GTACGAAAAA GATTACTTGC AAAGAATTGA ACAAGAAAAA
GCAGAACGTG AACAAGCTTA CCAAGAAGCA CTTGAAGCTG AAGTTGAAGC AAGAGCTAAA
CAAACACGAG GTAGCTTGCC AAAAGGTTTT GAACCCGCAC CGGAACCAGA ACCAGAACCT
GCAAAACCAA AAGGTACACT TCCAAAAGGT TTCTGA
 
Protein sequence
MAAKRKASTK KDLEAKIAEL EAKLSKLSSE IDAKPAETKP AEVKPAETKP AEVKPAETKP 
AEVKPAETKP AETKPAETKP AETAKPKPTL PKGMGEKPAE APKPEESPKP AETTAQPPAT
PNEALESAYY DAPMTDFHQY RAKVTGYSPA PNRYFVRMTA PVGKVPTSDW NQQKASVTGY
TACSNQYYAT RARLAYHPAD KRFGTFSGVN MSFDGVQIKE QTQQAPPPPP EPAKPKGTLP
KGMGDAPQPQ TTASSGDGKS RQEQLEEYEK DYLQRIEQEK AEREQAYQEA LEAEVEARAK
QTRGSLPKGF EPAPEPEPEP AKPKGTLPKG F