| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0553 |
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| Symbol | |
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| ID | 5773385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 493019 |
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| End bp | 493801 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316186 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001581887 |
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| Protein GI | 161528061 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
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| TIGRFAM ID | [TIGR01949] predicted phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.633374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTATCAG GTAACCAAAT TAGACTTAAT CGAATTCTTA GAAAAGGAAA GATGTTATGT
ATTCCAATGG ACCATGGAAT TTCAAATGGT CCTATTGAGG GTCTTGAAGA CCCAGCATCA
ACAATTTACA AATGTGAAGG TCACGGCCTT ACAAGTGTAA TAATTAACAA AGGAATTATC
AAATCATTAC CAAAACCACC CAAAGTCGGA GTTTTAGTTC ATTTTTCAAG TAGCACTGCA
TTATCATTAT CACCAAATCG AAAAATGCTC ACAGGTACTG TAAAAGAAGC AGTTGCATTA
GGAGCAGACG GTGTTTCATT ACACATCAAC ATTGGAGGAA AAGAAGAACC TGAAATGTTA
GAACAATTAG GATTAACAGC AGATCAATGT CACAGATGGG GAATGCCACT CTTAGCAATG
ATGTATCCAA GAGGAGAAAA CATCAAAGAC CCACATGATC CTGAAGTTGT TGCACATGTT
GCAAGAATTG GAGCAGAATG TGGAGCAGAT ATTGTTAAGA CATTGTACAC AGGAGACATT
GATTCATTTT CAAAAGTTGT AAAGAGTACA CCAGTTCCAA TTGTAATTGC AGGCGGACCA
AAAGCAAAAA CAGATTTAGA TATTCTTCAA ATGACTGAAG ATGCCATAGC AGCAGGAGCA
AAAGGTGTCA CATATGGAAG AAACATCTTT GCACATAAAG CACCTGAAAA AATGGTAGAA
GCACTAGCCG AAATAATTTT CAGAAAAGGT ACAGCAAAGG AAGCAATGAA GAAAATTGAG
TAA
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| Protein sequence | MVSGNQIRLN RILRKGKMLC IPMDHGISNG PIEGLEDPAS TIYKCEGHGL TSVIINKGII
KSLPKPPKVG VLVHFSSSTA LSLSPNRKML TGTVKEAVAL GADGVSLHIN IGGKEEPEML
EQLGLTADQC HRWGMPLLAM MYPRGENIKD PHDPEVVAHV ARIGAECGAD IVKTLYTGDI
DSFSKVVKST PVPIVIAGGP KAKTDLDILQ MTEDAIAAGA KGVTYGRNIF AHKAPEKMVE
ALAEIIFRKG TAKEAMKKIE
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