Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0551 |
Symbol | |
ID | 5772945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 491292 |
End bp | 491963 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641316184 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001581885 |
Protein GI | 161528059 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.93599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTACA AAACTTGTGT ATCAATTGCA GAAAAAACAC CTAACAAAGT CAAACAAACA TTAAAGATTG CTTTAAAAAA ATCAGATTTT GTTGAGATAA GATTTGATTT TCTAAAAATT GAACAAATTC CACAAACATT AGAACTAATC AAAAAAGATT TGAAAAAATC AGTATGTACC TTAAGACCAA AAACTGAAGG AGGTCAATTT CCAGGAAATG AAAAAGAAAG AATTGCAATA ATAAAACTGA TTGCAGAGTA TAATCCGTAT TTACTTGATG TAGAGTTTAA CACTCTGAAA CGAAATTCAT CACTAGTAAA ATATCTAAAA TCAACAAAAA CAAAACTACT TGTTTCATGG CATGACTTTA AGAAAACTCC AAGTTCTGCA GAGTTAAAAA AGAAAATGAA TCAGATGAGT AAATTCTCAA ATTTTGTAAA AATTGTCAGC ACAGCAAAAT CAACTGATGA TTCAACAAGA ATGCTTGAGT TATACAGCAA GAAAGGAAAA AACAACCTAA TCTCATTTGC AATGGGCGAT TTTGGCAGAA TTTCAAGGAT TTTGTGCCTG TATTTGGGCA GTCCATACAC GTATGTCTCT CTAGGAAAGC CAGTTGCACC AGGTCAGTTC AGTGTTGACG AAGTAAATAA AATCACTAAC TTGAAAAAAT AA
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Protein sequence | MKYKTCVSIA EKTPNKVKQT LKIALKKSDF VEIRFDFLKI EQIPQTLELI KKDLKKSVCT LRPKTEGGQF PGNEKERIAI IKLIAEYNPY LLDVEFNTLK RNSSLVKYLK STKTKLLVSW HDFKKTPSSA ELKKKMNQMS KFSNFVKIVS TAKSTDDSTR MLELYSKKGK NNLISFAMGD FGRISRILCL YLGSPYTYVS LGKPVAPGQF SVDEVNKITN LKK
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