| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0471 |
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| Symbol | |
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| ID | 5773644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 423259 |
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| End bp | 425484 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641316103 |
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| Product | copper amine oxidase-like protein |
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| Protein accession | YP_001581805 |
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| Protein GI | 161527979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0141512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAT TGAGTTCAAA AATAATAATC CCAATTGCAG TAGCCATTTC GGTAATAGTA
ACAGCAGGAA TAATGTATGC AATTGGTTTT GAACAAGAAC CACAGATTGT AGAAGTTCCA
ACTCCTGAAA TTGTCTATGT AGACAAATCA GCTTCAGAGT TTTTTGAAGG AACAAACGAC
ATCAAACAAA TATCATCACA AGAAGAACTA GTATCAATTC TTGAGGCATC ATCATTGTTT
GGTGGGGGAT TTTATGATAC AAGATCCATC AGAACTATGG TAGTAGCAGA ATCTGCAATG
TTTGATAGTG TAGAATCTGT TGCAGTATCA GCACCACAAG CAGAATTCAA AAGTGATGAC
GGAGGATCAG ATTATTCAAC AACTAATGTT CAAGTAGAAA ATGTAGATGA GCCAGACTAT
CTGAAAAATG ATTCAAAATA TGTATACATT GTTTCAAGAA ACACATTATC AATAATTGAT
GCATATCCAG CTGAAGATGC AAGATTAATT CTAAAAATTG CATTAGACAT TGAATCACAG
TACATCCAAA ACATGTTCCT CAATAAAGAC AGACTAGTGA TATTTTACAA TGGACAAAGT
GATGAGGAGA TAATCCCACA GTTTGACTTT ATTCCAAGAC CATCATACAA TCCAGTCACT
CACGCATTAA TTGTAGATGT GTCTGACAAG GAAAATCCAA CCATTCTCAA AGATTACTCT
ATTGATGGCC ATTTTAGAGA TGCCAGAATG ATTGGAGATT ATGCATACTT TGTTACAAAT
AATCACATCA ACCACCAGAA TCCCAGACTT CCAATAATAA TGGAGGATTC TGTTAGAATT
ATGACTCCAG ACGCATTTTA TTTTGACAAT GTTGAAGAGT TTTCAAACTT TAACACACTA
ACTGCAATTG ACATATTTGG AGATACAATA AACTCTGAAA CCTTCTTGAT GGGTTATTCA
GGAACATTTT ACGTATCTGA GAATAATTTC TACTTGACTT ATCAGCAAAA CATGCCATTT
GGATATTATG AGAATTCATC ACGCGATAGA TTCTACGATG TAATAGTTCC ATTACTTCCA
AATGACATCC AAGATGAAAT AAAGAGCATC CAAAATGATT CTTCATTGAA TTCATCTGAA
CAATGGGTAA AGATTTCAGA ATTGATGCAA AATTCCTACA ATGAAATGAG CAAAACAGAC
AAGGAAGAAT TGTTTGAAAA GATTAGAGAA GCACTAAATG AGTATGATGC AAAGATTCAA
GAAGAAAATA GAAAGACAAT CATTCACAAA ATTTCAATTG ATGAAGATAA AATAGAATAT
GTTGCAAAGG GAACAGTACC AGGTAGATTA CTAAACCAAT TCTCAATGGA TGAATCAGGA
GATAGATTCA GAGTTGCGAC AACAATAGAG TATTACATTC AACATGAAGG AACAATCCGC
TCAAATGCAG TATATGTCCT AGATGAACAA CTCAACATAG TAGGAGAACT AGAAGACATT
GCACCTGATG AGAGTATTTT CTCATCAAGA TTCATGGGAG ACAGGCTCTA TTTGGTAACA
TTTGAGCAAA TCGACCCATT CTTTGTAATT GATCTATCAA AGGATACACC AAAGATTTTG
GGAGAATTAA AGATACCAGG ATTCTCAAAT TATTTGCATC CATTTGATGA GGATCATGTA
ATTGGAATTG GACGAGATAC CAAAGTAGAT GAAAATGACA GAGTTCAACA ATTGGGAGTA
AAGGTTGCAT TATTCAATGT GGCAGATGTG AGCAACCCCA AAGTGTTAGA TGACTTTGTA
ATTGGAGACA GATCAAGCCA TTCTGAAGCA CAATACAATC ACAAGGCATT CTTCTTTGAC
AAATCAAGAA ATGTATTATC AATTCCAATA AGTGGAGATT CAGATAGATT AGAGCACATT
ACATCAAAGA TGTTTGCACC AGAATACAAC CGTTGGAGTG GATTCTATGT ATTTGATGTT
GATAGTACAA ATGGATTCTC CATTAAAGGA ACAATCACAC ATTCAGATAG TGACTCCAGA
TACTATGGAA TGGGAGATGC AAGAACATTC TACATTGACG ATGTATTGTA TACAGCATCT
CAAGGATATC TAAAGATGAA TTCATTTGAG AATCTAGAAG AAATCAACAC AATCAAACTT
GAAAACACTG GCAAGTTTAT TGATTATTTA GAAGAACCAA TGATGGAAGT AGAACCTGTT
AGATAA
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| Protein sequence | MIKLSSKIII PIAVAISVIV TAGIMYAIGF EQEPQIVEVP TPEIVYVDKS ASEFFEGTND
IKQISSQEEL VSILEASSLF GGGFYDTRSI RTMVVAESAM FDSVESVAVS APQAEFKSDD
GGSDYSTTNV QVENVDEPDY LKNDSKYVYI VSRNTLSIID AYPAEDARLI LKIALDIESQ
YIQNMFLNKD RLVIFYNGQS DEEIIPQFDF IPRPSYNPVT HALIVDVSDK ENPTILKDYS
IDGHFRDARM IGDYAYFVTN NHINHQNPRL PIIMEDSVRI MTPDAFYFDN VEEFSNFNTL
TAIDIFGDTI NSETFLMGYS GTFYVSENNF YLTYQQNMPF GYYENSSRDR FYDVIVPLLP
NDIQDEIKSI QNDSSLNSSE QWVKISELMQ NSYNEMSKTD KEELFEKIRE ALNEYDAKIQ
EENRKTIIHK ISIDEDKIEY VAKGTVPGRL LNQFSMDESG DRFRVATTIE YYIQHEGTIR
SNAVYVLDEQ LNIVGELEDI APDESIFSSR FMGDRLYLVT FEQIDPFFVI DLSKDTPKIL
GELKIPGFSN YLHPFDEDHV IGIGRDTKVD ENDRVQQLGV KVALFNVADV SNPKVLDDFV
IGDRSSHSEA QYNHKAFFFD KSRNVLSIPI SGDSDRLEHI TSKMFAPEYN RWSGFYVFDV
DSTNGFSIKG TITHSDSDSR YYGMGDARTF YIDDVLYTAS QGYLKMNSFE NLEEINTIKL
ENTGKFIDYL EEPMMEVEPV R
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