Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0421 |
Symbol | |
ID | 5773870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 377852 |
End bp | 378334 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641316051 |
Product | 3-isopropylmalate dehydratase small subunit |
Protein accession | YP_001581755 |
Protein GI | 161527929 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0517519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA ACGTCATAAA ATATGAAAGA GACAACATCG ATACTGATGT AATTATTCCT GGACAATACC TCAAGGTTCA TGATTATGCT GAACTTGCAA CTCACGCAAT GGAAGGTCTA GATCCTGACT TTCATTCCAA AGTAAAGGAA GGTGATTTTA TCTTGTCTGG AAAGAATTTT GGCTGTGGTT CATCACGTGA GCATGCCCCA ATTGCATTGT CTCACTCTGG CGTCAAGGCA GTACTTGCGT TATCTTTTGC CAGAATCTTT TACAGAAATT CTGTTGATGG TGCATTTTTG TTACCAATTG AAATTGAAGA AGATGCATAC AATGGAATCT CTGAAGGAGA TGAAATTGAT ATTGACATTA GCAAAAACGA AATCAATAAC TTGACAAAAA ATCAAACATA CAAGATGAAA CCATTCTCTG AGATTATTGG AAAAATAATT GAAGCTGGTG GTCTCTTTAA TTACAAACCA TAG
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Protein sequence | MKGNVIKYER DNIDTDVIIP GQYLKVHDYA ELATHAMEGL DPDFHSKVKE GDFILSGKNF GCGSSREHAP IALSHSGVKA VLALSFARIF YRNSVDGAFL LPIEIEEDAY NGISEGDEID IDISKNEINN LTKNQTYKMK PFSEIIGKII EAGGLFNYKP
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