| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0420 |
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| Symbol | |
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| ID | 5774001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 376584 |
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| End bp | 377852 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641316050 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | YP_001581754 |
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| Protein GI | 161527928 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0665356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTG TAGAGAAGAT TCTTGCTCGT GCATCAGGAA AATCGCAAGT TGCCCCTGAT
GATGTAGTTT TTGCAAAGGT CGACAAGGTA ATGGTTCATG ATGTTTCTGG ACCTGGAGTT
CTCAAGGTGT TTGATAAATT AAAAAACAAA GGTGTTGATG TCAGCAAACT TTGGGATCCT
ACAAAGGTAT GGGTTGCTGA AGATCACTTT GTTCCTTCTG CAGAAAAAAT ATCTGCTGAA
AATATCGTTA AATTATCAAA TTTCACAAAA AACTATGGAA TTGAAAAACA CTTCAAATAT
GGAATGGGTC AGTATGGAAT CTGCCATACA TTATCTCATG AAGAAGCAAT GGTGATGCCT
GGTGATGTCT ATGTTGGCGG TGATTCTCAC ACAAACACTA CGGGTGCACT TGGTGCATTT
GCATGTGGGT TAGGTCATAC TGATATTGCA TATGTTTTGC TTAATGGACA AATCTGGTTT
AAGGTGCCAG AGACTGATTA TTTCAAACTA AACGGAAAAC TCCCAGATCA TGTAATGGCT
AAAGATTTGA TCTTGAAAAT CATTGGCGAT ATTGGAACTG ATGGAGGAAA TTACAGAACA
ATGCAGTTTG GCGGTACTGG GATTGATGAG ATGTCTGTTG AAAGCAGATT GACACTATGT
AACATGACAA CAGAAGCTGG AGCAAAGAAT GGAATTGCTG AAGCTGATCA AAAAGTCGTA
GATTATCTTT CTAGTAGAGG TGCAACAAAT GCACAAGTAT TCAAAGGTGA TGATGATGCA
CAGTATGCAA ATGTGTATGA GTATGAAGCC TCTGAAATGG AACCTCTTGT CGCAAAACCA
TTCTCTCCTG AAAATATTGC AGTAGTAAGA GAAGCTCCTT CAGTAGAACT TGACAAATCC
TACATCGGTT CTTGTACTGG GGCAAAGTAT GAAGACTTGG AAGCTGCAGC AAAGATTCTC
AAAGGAAAGA CTGTAAAGAT TAGAACAGAA ATTCTTCCAG CATCTATCTC AATTTACAAG
CGTGCAATGG AAAATGGATT ACTTACCATA TTCTTAGATG CAGGCGTTAC TGTAGGTCCA
CCAACTTGTG GTGCATGTTG TGGAGCACAC ATGGGTGTTT TGGCTAAAAA TGAAATCTGC
ATAAGCACTA CAAACAGAAA TTTCCCAGGT AGAATGGGTC ATGTAGAGTC TGAGACATAT
CTTTCATCTC CAATGGTTGC TGCAGCTTCC GCAGTAACTG GAAAAATCAC TGATCCGAGG
GATTTGTAA
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| Protein sequence | MNIVEKILAR ASGKSQVAPD DVVFAKVDKV MVHDVSGPGV LKVFDKLKNK GVDVSKLWDP
TKVWVAEDHF VPSAEKISAE NIVKLSNFTK NYGIEKHFKY GMGQYGICHT LSHEEAMVMP
GDVYVGGDSH TNTTGALGAF ACGLGHTDIA YVLLNGQIWF KVPETDYFKL NGKLPDHVMA
KDLILKIIGD IGTDGGNYRT MQFGGTGIDE MSVESRLTLC NMTTEAGAKN GIAEADQKVV
DYLSSRGATN AQVFKGDDDA QYANVYEYEA SEMEPLVAKP FSPENIAVVR EAPSVELDKS
YIGSCTGAKY EDLEAAAKIL KGKTVKIRTE ILPASISIYK RAMENGLLTI FLDAGVTVGP
PTCGACCGAH MGVLAKNEIC ISTTNRNFPG RMGHVESETY LSSPMVAAAS AVTGKITDPR
DL
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